Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRAK1Q9UPV9 AL353803.4-201ENST00000565882 1934 ntBASIC31.16■■■□□ 2.58
TRAK1Q9UPV9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRAK1Q9UPV9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.16■■■□□ 2.58
TRAK1Q9UPV9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
TRAK1Q9UPV9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC31.16■■■□□ 2.58
TRAK1Q9UPV9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
TRAK1Q9UPV9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRAK1Q9UPV9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRAK1Q9UPV9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.14■■■□□ 2.58
TRAK1Q9UPV9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
TRAK1Q9UPV9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC31.13■■■□□ 2.57
TRAK1Q9UPV9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.13■■■□□ 2.57
TRAK1Q9UPV9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
TRAK1Q9UPV9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TRAK1Q9UPV9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRAK1Q9UPV9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC31.12■■■□□ 2.57
TRAK1Q9UPV9 KRT18P61-201ENST00000585825 1298 ntBASIC31.12■■■□□ 2.57
TRAK1Q9UPV9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC31.12■■■□□ 2.57
TRAK1Q9UPV9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRAK1Q9UPV9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
TRAK1Q9UPV9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
TRAK1Q9UPV9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.12■■■□□ 2.57
TRAK1Q9UPV9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TRAK1Q9UPV9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRAK1Q9UPV9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRAK1Q9UPV9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TRAK1Q9UPV9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC31.1■■■□□ 2.57
TRAK1Q9UPV9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC31.1■■■□□ 2.57
TRAK1Q9UPV9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
TRAK1Q9UPV9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRAK1Q9UPV9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
TRAK1Q9UPV9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.08■■■□□ 2.57
TRAK1Q9UPV9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.08■■■□□ 2.57
TRAK1Q9UPV9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRAK1Q9UPV9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
TRAK1Q9UPV9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
TRAK1Q9UPV9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
TRAK1Q9UPV9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
TRAK1Q9UPV9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 TPRG1LP1-201ENST00000598702 760 ntBASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC31.06■■■□□ 2.56
TRAK1Q9UPV9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TRAK1Q9UPV9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.05■■■□□ 2.56
TRAK1Q9UPV9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms