Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ZCCHC3Q9NUD5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 AL356740.2-201ENST00000601559 647 ntBASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 AC127496.7-201ENST00000625110 1798 ntBASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZCCHC3Q9NUD5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZCCHC3Q9NUD5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 AC004687.1-201ENST00000579003 1625 ntBASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 AC242852.2-201ENST00000615738 1807 ntBASIC20.67■□□□□ 0.9
ZCCHC3Q9NUD5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 AC087742.1-201ENST00000575880 1738 ntBASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZCCHC3Q9NUD5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ZCCHC3Q9NUD5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.65■□□□□ 0.9
ZCCHC3Q9NUD5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZCCHC3Q9NUD5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZCCHC3Q9NUD5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
ZCCHC3Q9NUD5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZCCHC3Q9NUD5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZCCHC3Q9NUD5 LINC00526-201ENST00000581067 1875 ntBASIC20.64■□□□□ 0.9
ZCCHC3Q9NUD5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.64■□□□□ 0.9
ZCCHC3Q9NUD5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZCCHC3Q9NUD5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.64■□□□□ 0.9
ZCCHC3Q9NUD5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 MIR3621-201ENST00000580529 85 ntBASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 AC241377.3-202ENST00000626088 1088 ntBASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 AC241585.3-202ENST00000628937 1088 ntBASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 AC245100.8-202ENST00000629247 1058 ntBASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 LINC01960-201ENST00000563759 1884 ntBASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZCCHC3Q9NUD5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ZCCHC3Q9NUD5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms