Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.48■□□□□ 0.55
Q9N2K0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.48■□□□□ 0.55
Q9N2K0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q9N2K0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Q9N2K0 C11orf96-202ENST00000528572 1834 ntBASIC18.48■□□□□ 0.55
Q9N2K0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.48■□□□□ 0.55
Q9N2K0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Q9N2K0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.48■□□□□ 0.55
Q9N2K0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q9N2K0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q9N2K0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Q9N2K0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Q9N2K0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q9N2K0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q9N2K0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.47■□□□□ 0.55
Q9N2K0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.47■□□□□ 0.55
Q9N2K0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Q9N2K0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q9N2K0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Q9N2K0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Q9N2K0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q9N2K0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q9N2K0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.46■□□□□ 0.55
Q9N2K0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q9N2K0 AC021242.3-201ENST00000607598 1377 ntBASIC18.46■□□□□ 0.55
Q9N2K0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Q9N2K0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q9N2K0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.46■□□□□ 0.55
Q9N2K0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.46■□□□□ 0.55
Q9N2K0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q9N2K0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Q9N2K0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q9N2K0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Q9N2K0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q9N2K0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Q9N2K0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.45■□□□□ 0.54
Q9N2K0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Q9N2K0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Q9N2K0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Q9N2K0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Q9N2K0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Q9N2K0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.44■□□□□ 0.54
Q9N2K0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Q9N2K0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Q9N2K0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q9N2K0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q9N2K0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.43■□□□□ 0.54
Q9N2K0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Q9N2K0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q9N2K0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q9N2K0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q9N2K0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q9N2K0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q9N2K0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Q9N2K0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
Q9N2K0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Q9N2K0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Q9N2K0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Q9N2K0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.42■□□□□ 0.54
Q9N2K0 BX664725.1-201ENST00000438252 379 ntBASIC18.42■□□□□ 0.54
Q9N2K0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Q9N2K0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.42■□□□□ 0.54
Q9N2K0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Q9N2K0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.42■□□□□ 0.54
Q9N2K0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.42■□□□□ 0.54
Q9N2K0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q9N2K0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q9N2K0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q9N2K0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.41■□□□□ 0.54
Q9N2K0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.41■□□□□ 0.54
Q9N2K0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.41■□□□□ 0.54
Q9N2K0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.41■□□□□ 0.54
Q9N2K0 DUX4L4-201ENST00000566884 1269 ntBASIC18.41■□□□□ 0.54
Q9N2K0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.41■□□□□ 0.54
Q9N2K0 AC009086.3-201ENST00000623486 1008 ntBASIC18.41■□□□□ 0.54
Q9N2K0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Q9N2K0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q9N2K0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Q9N2K0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.41■□□□□ 0.54
Q9N2K0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Q9N2K0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Q9N2K0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.41■□□□□ 0.54
Q9N2K0 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.41■□□□□ 0.54
Q9N2K0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9N2K0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.4■□□□□ 0.54
Q9N2K0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9N2K0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9N2K0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q9N2K0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms