Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 EP400NL-214ENST00000641289 2402 ntBASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEUROD4Q9HD90 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.77■□□□□ 0.92
NEUROD4Q9HD90 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NEUROD4Q9HD90 AC087742.1-201ENST00000575880 1738 ntBASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 KRT16P3-201ENST00000439127 1283 ntBASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEUROD4Q9HD90 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 AL117332.1-201ENST00000622628 974 ntBASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.74■□□□□ 0.91
NEUROD4Q9HD90 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEUROD4Q9HD90 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEUROD4Q9HD90 LINC01960-201ENST00000563759 1884 ntBASIC20.73■□□□□ 0.91
NEUROD4Q9HD90 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEUROD4Q9HD90 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEUROD4Q9HD90 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NEUROD4Q9HD90 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEUROD4Q9HD90 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEUROD4Q9HD90 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEUROD4Q9HD90 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms