Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HES4Q9HCC6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.62■□□□□ 0.57
HES4Q9HCC6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.62■□□□□ 0.57
HES4Q9HCC6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.62■□□□□ 0.57
HES4Q9HCC6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HES4Q9HCC6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HES4Q9HCC6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.61■□□□□ 0.57
HES4Q9HCC6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
HES4Q9HCC6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.61■□□□□ 0.57
HES4Q9HCC6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.61■□□□□ 0.57
HES4Q9HCC6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.61■□□□□ 0.57
HES4Q9HCC6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HES4Q9HCC6 AC127496.7-201ENST00000625110 1798 ntBASIC18.6■□□□□ 0.57
HES4Q9HCC6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.6■□□□□ 0.57
HES4Q9HCC6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.6■□□□□ 0.57
HES4Q9HCC6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HES4Q9HCC6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.6■□□□□ 0.57
HES4Q9HCC6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.6■□□□□ 0.57
HES4Q9HCC6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.6■□□□□ 0.57
HES4Q9HCC6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.6■□□□□ 0.57
HES4Q9HCC6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 AL117328.2-201ENST00000624617 1940 ntBASIC18.6■□□□□ 0.57
HES4Q9HCC6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HES4Q9HCC6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HES4Q9HCC6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HES4Q9HCC6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.59■□□□□ 0.57
HES4Q9HCC6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.59■□□□□ 0.57
HES4Q9HCC6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.59■□□□□ 0.57
HES4Q9HCC6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.59■□□□□ 0.57
HES4Q9HCC6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HES4Q9HCC6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HES4Q9HCC6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HES4Q9HCC6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HES4Q9HCC6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HES4Q9HCC6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HES4Q9HCC6 AC087742.1-201ENST00000575880 1738 ntBASIC18.58■□□□□ 0.57
HES4Q9HCC6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HES4Q9HCC6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HES4Q9HCC6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.58■□□□□ 0.56
HES4Q9HCC6 SRD5A1P1-201ENST00000442297 786 ntBASIC18.58■□□□□ 0.56
HES4Q9HCC6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HES4Q9HCC6 AC099791.2-201ENST00000605725 427 ntBASIC18.58■□□□□ 0.56
HES4Q9HCC6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.58■□□□□ 0.56
HES4Q9HCC6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HES4Q9HCC6 AC004687.1-201ENST00000579003 1625 ntBASIC18.58■□□□□ 0.56
HES4Q9HCC6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HES4Q9HCC6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.58■□□□□ 0.56
HES4Q9HCC6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HES4Q9HCC6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.57■□□□□ 0.56
HES4Q9HCC6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 AC006455.2-201ENST00000429931 906 ntBASIC18.57■□□□□ 0.56
HES4Q9HCC6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HES4Q9HCC6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HES4Q9HCC6 GUSBP5-202ENST00000510805 1989 ntBASIC18.57■□□□□ 0.56
HES4Q9HCC6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms