Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS16Q9H269 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
VPS16Q9H269 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS16Q9H269 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS16Q9H269 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
VPS16Q9H269 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS16Q9H269 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS16Q9H269 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.23■■□□□ 1.47
VPS16Q9H269 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS16Q9H269 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
VPS16Q9H269 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.23■■□□□ 1.47
VPS16Q9H269 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS16Q9H269 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS16Q9H269 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS16Q9H269 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VPS16Q9H269 AC007375.3-201ENST00000600936 2314 ntBASIC24.22■■□□□ 1.47
VPS16Q9H269 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VPS16Q9H269 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
VPS16Q9H269 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.22■■□□□ 1.47
VPS16Q9H269 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
VPS16Q9H269 C11orf96-202ENST00000528572 1834 ntBASIC24.21■■□□□ 1.47
VPS16Q9H269 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VPS16Q9H269 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
VPS16Q9H269 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
VPS16Q9H269 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
VPS16Q9H269 FP325331.1-202ENST00000623531 1380 ntBASIC24.21■■□□□ 1.47
VPS16Q9H269 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.21■■□□□ 1.47
VPS16Q9H269 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
VPS16Q9H269 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VPS16Q9H269 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.21■■□□□ 1.47
VPS16Q9H269 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
VPS16Q9H269 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VPS16Q9H269 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.2■■□□□ 1.47
VPS16Q9H269 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
VPS16Q9H269 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VPS16Q9H269 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
VPS16Q9H269 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
VPS16Q9H269 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.2■■□□□ 1.46
VPS16Q9H269 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.2■■□□□ 1.46
VPS16Q9H269 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.2■■□□□ 1.46
VPS16Q9H269 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
VPS16Q9H269 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
VPS16Q9H269 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
VPS16Q9H269 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
VPS16Q9H269 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
VPS16Q9H269 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
VPS16Q9H269 AC092028.1-203ENST00000608262 953 ntBASIC24.19■■□□□ 1.46
VPS16Q9H269 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.19■■□□□ 1.46
VPS16Q9H269 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.19■■□□□ 1.46
VPS16Q9H269 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
VPS16Q9H269 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
VPS16Q9H269 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
VPS16Q9H269 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS16Q9H269 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS16Q9H269 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS16Q9H269 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.18■■□□□ 1.46
VPS16Q9H269 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS16Q9H269 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS16Q9H269 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.18■■□□□ 1.46
VPS16Q9H269 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS16Q9H269 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS16Q9H269 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
VPS16Q9H269 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
VPS16Q9H269 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.17■■□□□ 1.46
VPS16Q9H269 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VPS16Q9H269 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
VPS16Q9H269 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
VPS16Q9H269 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.17■■□□□ 1.46
VPS16Q9H269 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
VPS16Q9H269 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VPS16Q9H269 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
VPS16Q9H269 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
VPS16Q9H269 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
VPS16Q9H269 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VPS16Q9H269 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
VPS16Q9H269 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
VPS16Q9H269 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
VPS16Q9H269 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.15■■□□□ 1.46
VPS16Q9H269 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.15■■□□□ 1.46
VPS16Q9H269 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
VPS16Q9H269 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VPS16Q9H269 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.14■■□□□ 1.46
VPS16Q9H269 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
VPS16Q9H269 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.14■■□□□ 1.45
VPS16Q9H269 DUX4L4-201ENST00000566884 1269 ntBASIC24.14■■□□□ 1.45
VPS16Q9H269 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.14■■□□□ 1.45
VPS16Q9H269 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
VPS16Q9H269 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
VPS16Q9H269 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VPS16Q9H269 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
VPS16Q9H269 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
VPS16Q9H269 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VPS16Q9H269 AC009102.2-201ENST00000606772 1639 ntBASIC24.13■■□□□ 1.45
VPS16Q9H269 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
VPS16Q9H269 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
VPS16Q9H269 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
VPS16Q9H269 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VPS16Q9H269 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VPS16Q9H269 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.12■■□□□ 1.45
VPS16Q9H269 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms