Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 ALDH1A3-203ENST00000557963 1670 ntBASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SEC22CQ9BRL7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SEC22CQ9BRL7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.62■□□□□ 0.57
SEC22CQ9BRL7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.62■□□□□ 0.57
SEC22CQ9BRL7 AL022069.1-201ENST00000568025 1636 ntBASIC18.62■□□□□ 0.57
SEC22CQ9BRL7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEC22CQ9BRL7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEC22CQ9BRL7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SEC22CQ9BRL7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC22CQ9BRL7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 AC087742.1-201ENST00000575880 1738 ntBASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SEC22CQ9BRL7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC22CQ9BRL7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SEC22CQ9BRL7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SEC22CQ9BRL7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.58■□□□□ 0.57
SEC22CQ9BRL7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SEC22CQ9BRL7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SEC22CQ9BRL7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.58■□□□□ 0.57
SEC22CQ9BRL7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 KRT18P10-201ENST00000388836 1287 ntBASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC22CQ9BRL7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 RP9P-202ENST00000450133 1212 ntBASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 AC093536.1-201ENST00000569153 554 ntBASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC22CQ9BRL7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SEC22CQ9BRL7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms