Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX18Q96RF0 AL356441.2-201ENST00000443009 864 ntBASIC19.97■□□□□ 0.79
SNX18Q96RF0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.97■□□□□ 0.79
SNX18Q96RF0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SNX18Q96RF0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX18Q96RF0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX18Q96RF0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.97■□□□□ 0.79
SNX18Q96RF0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.97■□□□□ 0.79
SNX18Q96RF0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SNX18Q96RF0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX18Q96RF0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX18Q96RF0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX18Q96RF0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX18Q96RF0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX18Q96RF0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX18Q96RF0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX18Q96RF0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.96■□□□□ 0.79
SNX18Q96RF0 KRT125P-201ENST00000546827 989 ntBASIC19.96■□□□□ 0.79
SNX18Q96RF0 Z92544.1-202ENST00000571933 1220 ntBASIC19.96■□□□□ 0.79
SNX18Q96RF0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SNX18Q96RF0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX18Q96RF0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX18Q96RF0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX18Q96RF0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
SNX18Q96RF0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SNX18Q96RF0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX18Q96RF0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX18Q96RF0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
SNX18Q96RF0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX18Q96RF0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX18Q96RF0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.95■□□□□ 0.78
SNX18Q96RF0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.95■□□□□ 0.78
SNX18Q96RF0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX18Q96RF0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNX18Q96RF0 BX664725.1-201ENST00000438252 379 ntBASIC19.95■□□□□ 0.78
SNX18Q96RF0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.95■□□□□ 0.78
SNX18Q96RF0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX18Q96RF0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNX18Q96RF0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.95■□□□□ 0.78
SNX18Q96RF0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.95■□□□□ 0.78
SNX18Q96RF0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX18Q96RF0 AC144652.1-201ENST00000609974 1624 ntBASIC19.94■□□□□ 0.78
SNX18Q96RF0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX18Q96RF0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX18Q96RF0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX18Q96RF0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX18Q96RF0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX18Q96RF0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX18Q96RF0 AC005703.6-201ENST00000623265 1329 ntBASIC19.94■□□□□ 0.78
SNX18Q96RF0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SNX18Q96RF0 AL353803.4-201ENST00000565882 1934 ntBASIC19.94■□□□□ 0.78
SNX18Q96RF0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX18Q96RF0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX18Q96RF0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX18Q96RF0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX18Q96RF0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX18Q96RF0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX18Q96RF0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNX18Q96RF0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SNX18Q96RF0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX18Q96RF0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNX18Q96RF0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX18Q96RF0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX18Q96RF0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
SNX18Q96RF0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 ECEL1P1-201ENST00000373592 1742 ntBASIC19.91■□□□□ 0.78
SNX18Q96RF0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX18Q96RF0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SNX18Q96RF0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms