Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL21A1Q96P44 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL21A1Q96P44 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.77■□□□□ 0.92
COL21A1Q96P44 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COL21A1Q96P44 AC009102.2-201ENST00000606772 1639 ntBASIC20.77■□□□□ 0.92
COL21A1Q96P44 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL21A1Q96P44 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL21A1Q96P44 GUSBP5-202ENST00000510805 1989 ntBASIC20.77■□□□□ 0.92
COL21A1Q96P44 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COL21A1Q96P44 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL21A1Q96P44 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COL21A1Q96P44 AC127496.7-201ENST00000625110 1798 ntBASIC20.77■□□□□ 0.91
COL21A1Q96P44 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COL21A1Q96P44 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.76■□□□□ 0.91
COL21A1Q96P44 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.76■□□□□ 0.91
COL21A1Q96P44 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL21A1Q96P44 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.76■□□□□ 0.91
COL21A1Q96P44 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.76■□□□□ 0.91
COL21A1Q96P44 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL21A1Q96P44 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.76■□□□□ 0.91
COL21A1Q96P44 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.76■□□□□ 0.91
COL21A1Q96P44 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL21A1Q96P44 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL21A1Q96P44 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.76■□□□□ 0.91
COL21A1Q96P44 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL21A1Q96P44 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL21A1Q96P44 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL21A1Q96P44 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL21A1Q96P44 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL21A1Q96P44 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.75■□□□□ 0.91
COL21A1Q96P44 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.75■□□□□ 0.91
COL21A1Q96P44 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
COL21A1Q96P44 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL21A1Q96P44 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
COL21A1Q96P44 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL21A1Q96P44 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL21A1Q96P44 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL21A1Q96P44 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COL21A1Q96P44 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.74■□□□□ 0.91
COL21A1Q96P44 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL21A1Q96P44 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL21A1Q96P44 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL21A1Q96P44 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL21A1Q96P44 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL21A1Q96P44 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL21A1Q96P44 AC137767.1-201ENST00000602918 1920 ntBASIC20.74■□□□□ 0.91
COL21A1Q96P44 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL21A1Q96P44 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.74■□□□□ 0.91
COL21A1Q96P44 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
COL21A1Q96P44 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL21A1Q96P44 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.73■□□□□ 0.91
COL21A1Q96P44 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL21A1Q96P44 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL21A1Q96P44 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COL21A1Q96P44 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.73■□□□□ 0.91
COL21A1Q96P44 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.73■□□□□ 0.91
COL21A1Q96P44 AL512631.2-201ENST00000604634 923 ntBASIC20.73■□□□□ 0.91
COL21A1Q96P44 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.73■□□□□ 0.91
COL21A1Q96P44 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.73■□□□□ 0.91
COL21A1Q96P44 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL21A1Q96P44 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.73■□□□□ 0.91
COL21A1Q96P44 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL21A1Q96P44 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL21A1Q96P44 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
COL21A1Q96P44 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.72■□□□□ 0.91
COL21A1Q96P44 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL21A1Q96P44 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL21A1Q96P44 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
COL21A1Q96P44 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL21A1Q96P44 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL21A1Q96P44 AC131281.2-201ENST00000520478 145 ntBASIC20.72■□□□□ 0.91
COL21A1Q96P44 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
COL21A1Q96P44 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.72■□□□□ 0.91
COL21A1Q96P44 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COL21A1Q96P44 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL21A1Q96P44 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.72■□□□□ 0.91
COL21A1Q96P44 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL21A1Q96P44 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL21A1Q96P44 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.71■□□□□ 0.91
COL21A1Q96P44 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.71■□□□□ 0.91
COL21A1Q96P44 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.71■□□□□ 0.91
COL21A1Q96P44 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL21A1Q96P44 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COL21A1Q96P44 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
COL21A1Q96P44 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL21A1Q96P44 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL21A1Q96P44 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL21A1Q96P44 C17orf82-201ENST00000623772 1530 ntBASIC20.7■□□□□ 0.9
COL21A1Q96P44 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL21A1Q96P44 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL21A1Q96P44 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.7■□□□□ 0.9
COL21A1Q96P44 AC144652.1-201ENST00000609974 1624 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms