Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 MTDHP2-201ENST00000601468 714 ntBASIC19.13■□□□□ 0.65
SEH1LQ96EE3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEH1LQ96EE3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 AC010997.5-201ENST00000609182 354 ntBASIC19.12■□□□□ 0.65
SEH1LQ96EE3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 AL137060.1-201ENST00000618151 2648 ntBASIC19.12■□□□□ 0.65
SEH1LQ96EE3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.12■□□□□ 0.65
SEH1LQ96EE3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEH1LQ96EE3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 MIR6722-201ENST00000617286 78 ntBASIC19.1■□□□□ 0.65
SEH1LQ96EE3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEH1LQ96EE3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEH1LQ96EE3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEH1LQ96EE3 PKD1P6-201ENST00000343738 4769 ntBASIC19.08■□□□□ 0.65
SEH1LQ96EE3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEH1LQ96EE3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEH1LQ96EE3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SEH1LQ96EE3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEH1LQ96EE3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEH1LQ96EE3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEH1LQ96EE3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.08■□□□□ 0.64
SEH1LQ96EE3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.08■□□□□ 0.64
SEH1LQ96EE3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEH1LQ96EE3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEH1LQ96EE3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEH1LQ96EE3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms