Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
USP9XQ93008 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP9XQ93008 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP9XQ93008 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.51■□□□□ 0.71
USP9XQ93008 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.51■□□□□ 0.71
USP9XQ93008 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 SLC7A5P1-201ENST00000568957 537 ntBASIC19.51■□□□□ 0.71
USP9XQ93008 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP9XQ93008 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP9XQ93008 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP9XQ93008 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
USP9XQ93008 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
USP9XQ93008 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
USP9XQ93008 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.5■□□□□ 0.71
USP9XQ93008 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.5■□□□□ 0.71
USP9XQ93008 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP9XQ93008 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP9XQ93008 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP9XQ93008 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP9XQ93008 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.49■□□□□ 0.71
USP9XQ93008 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP9XQ93008 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP9XQ93008 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP9XQ93008 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.49■□□□□ 0.71
USP9XQ93008 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.49■□□□□ 0.71
USP9XQ93008 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.49■□□□□ 0.71
USP9XQ93008 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP9XQ93008 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.49■□□□□ 0.71
USP9XQ93008 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP9XQ93008 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
USP9XQ93008 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.48■□□□□ 0.71
USP9XQ93008 AC133552.2-202ENST00000575694 574 ntBASIC19.48■□□□□ 0.71
USP9XQ93008 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.48■□□□□ 0.71
USP9XQ93008 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP9XQ93008 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.48■□□□□ 0.71
USP9XQ93008 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.48■□□□□ 0.71
USP9XQ93008 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.48■□□□□ 0.71
USP9XQ93008 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.48■□□□□ 0.71
USP9XQ93008 AL596275.1-201ENST00000423464 877 ntBASIC19.48■□□□□ 0.71
USP9XQ93008 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.48■□□□□ 0.71
USP9XQ93008 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP9XQ93008 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP9XQ93008 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP9XQ93008 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP9XQ93008 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP9XQ93008 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.47■□□□□ 0.71
USP9XQ93008 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
USP9XQ93008 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.47■□□□□ 0.71
USP9XQ93008 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.47■□□□□ 0.71
USP9XQ93008 AC231657.2-201ENST00000624556 255 ntBASIC19.47■□□□□ 0.71
USP9XQ93008 ALDH1A3-203ENST00000557963 1670 ntBASIC19.47■□□□□ 0.71
USP9XQ93008 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP9XQ93008 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP9XQ93008 DUSP5P2-201ENST00000426873 1033 ntBASIC19.47■□□□□ 0.71
USP9XQ93008 RNA5SP413-201ENST00000516373 109 ntBASIC19.47■□□□□ 0.71
USP9XQ93008 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.47■□□□□ 0.71
USP9XQ93008 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP9XQ93008 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
USP9XQ93008 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.47■□□□□ 0.71
USP9XQ93008 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP9XQ93008 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.47■□□□□ 0.71
USP9XQ93008 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP9XQ93008 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.47■□□□□ 0.71
USP9XQ93008 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.47■□□□□ 0.71
USP9XQ93008 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP9XQ93008 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.46■□□□□ 0.71
USP9XQ93008 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP9XQ93008 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP9XQ93008 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
USP9XQ93008 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP9XQ93008 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP9XQ93008 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.46■□□□□ 0.71
USP9XQ93008 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP9XQ93008 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.46■□□□□ 0.71
USP9XQ93008 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP9XQ93008 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP9XQ93008 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP9XQ93008 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP9XQ93008 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP9XQ93008 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
USP9XQ93008 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP9XQ93008 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP9XQ93008 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.45■□□□□ 0.7
USP9XQ93008 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.45■□□□□ 0.7
USP9XQ93008 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.45■□□□□ 0.7
USP9XQ93008 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.45■□□□□ 0.7
USP9XQ93008 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP9XQ93008 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP9XQ93008 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP9XQ93008 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.44■□□□□ 0.7
USP9XQ93008 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP9XQ93008 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.44■□□□□ 0.7
USP9XQ93008 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.44■□□□□ 0.7
USP9XQ93008 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms