Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC71LQ8N9Z2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC71LQ8N9Z2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CCDC71LQ8N9Z2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC71LQ8N9Z2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC71LQ8N9Z2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 FBXW4P1-201ENST00000426721 2239 ntBASIC18.33■□□□□ 0.52
CCDC71LQ8N9Z2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 AC080038.3-201ENST00000623346 1952 ntBASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71LQ8N9Z2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 AL137060.1-201ENST00000618151 2648 ntBASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC71LQ8N9Z2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71LQ8N9Z2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 AC004448.1-201ENST00000458332 883 ntBASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 AC019171.1-201ENST00000601251 1056 ntBASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC71LQ8N9Z2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC71LQ8N9Z2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 AC087742.1-201ENST00000575880 1738 ntBASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CCDC71LQ8N9Z2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC71LQ8N9Z2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC71LQ8N9Z2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC71LQ8N9Z2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CCDC71LQ8N9Z2 AL024507.2-201ENST00000606070 2574 ntBASIC18.27■□□□□ 0.51
CCDC71LQ8N9Z2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC71LQ8N9Z2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms