Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.14■□□□□ 0.97
COL27A1Q8IZC6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL27A1Q8IZC6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL27A1Q8IZC6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL27A1Q8IZC6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.12■□□□□ 0.97
COL27A1Q8IZC6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL27A1Q8IZC6 AC104771.1-201ENST00000603335 964 ntBASIC21.12■□□□□ 0.97
COL27A1Q8IZC6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL27A1Q8IZC6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 AC026185.1-201ENST00000445748 174 ntBASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 AC080038.1-201ENST00000611274 1154 ntBASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.11■□□□□ 0.97
COL27A1Q8IZC6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.1■□□□□ 0.97
COL27A1Q8IZC6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL27A1Q8IZC6 AC004687.1-201ENST00000579003 1625 ntBASIC21.1■□□□□ 0.97
COL27A1Q8IZC6 MIR663A-201ENST00000385250 93 ntBASIC21.1■□□□□ 0.97
COL27A1Q8IZC6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL27A1Q8IZC6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
COL27A1Q8IZC6 AC142381.3-201ENST00000568208 1670 ntBASIC21.1■□□□□ 0.97
COL27A1Q8IZC6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 CROCCP5-201ENST00000436658 830 ntBASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 SMUG1P1-201ENST00000590640 811 ntBASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.09■□□□□ 0.97
COL27A1Q8IZC6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.08■□□□□ 0.97
COL27A1Q8IZC6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL27A1Q8IZC6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL27A1Q8IZC6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL27A1Q8IZC6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
COL27A1Q8IZC6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
COL27A1Q8IZC6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.08■□□□□ 0.97
COL27A1Q8IZC6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.08■□□□□ 0.97
COL27A1Q8IZC6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
COL27A1Q8IZC6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
COL27A1Q8IZC6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 BX005040.4-201ENST00000637145 1518 ntBASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.07■□□□□ 0.96
COL27A1Q8IZC6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL27A1Q8IZC6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms