Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.4■□□□□ 0.86
VRK2Q86Y07 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VRK2Q86Y07 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VRK2Q86Y07 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VRK2Q86Y07 AC080038.3-201ENST00000623346 1952 ntBASIC20.39■□□□□ 0.86
VRK2Q86Y07 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VRK2Q86Y07 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VRK2Q86Y07 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VRK2Q86Y07 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VRK2Q86Y07 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VRK2Q86Y07 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.39■□□□□ 0.85
VRK2Q86Y07 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VRK2Q86Y07 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.39■□□□□ 0.85
VRK2Q86Y07 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.39■□□□□ 0.85
VRK2Q86Y07 AC009086.3-201ENST00000623486 1008 ntBASIC20.39■□□□□ 0.85
VRK2Q86Y07 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
VRK2Q86Y07 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VRK2Q86Y07 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VRK2Q86Y07 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VRK2Q86Y07 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VRK2Q86Y07 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VRK2Q86Y07 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VRK2Q86Y07 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
VRK2Q86Y07 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
VRK2Q86Y07 KRT16P3-201ENST00000439127 1283 ntBASIC20.38■□□□□ 0.85
VRK2Q86Y07 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.38■□□□□ 0.85
VRK2Q86Y07 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.38■□□□□ 0.85
VRK2Q86Y07 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
VRK2Q86Y07 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VRK2Q86Y07 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
VRK2Q86Y07 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VRK2Q86Y07 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VRK2Q86Y07 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VRK2Q86Y07 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VRK2Q86Y07 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
VRK2Q86Y07 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VRK2Q86Y07 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.37■□□□□ 0.85
VRK2Q86Y07 AC004687.1-201ENST00000579003 1625 ntBASIC20.37■□□□□ 0.85
VRK2Q86Y07 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.37■□□□□ 0.85
VRK2Q86Y07 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VRK2Q86Y07 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VRK2Q86Y07 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VRK2Q86Y07 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VRK2Q86Y07 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
VRK2Q86Y07 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.36■□□□□ 0.85
VRK2Q86Y07 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.36■□□□□ 0.85
VRK2Q86Y07 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 AC139530.1-201ENST00000575312 1977 ntBASIC20.36■□□□□ 0.85
VRK2Q86Y07 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.36■□□□□ 0.85
VRK2Q86Y07 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
VRK2Q86Y07 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.36■□□□□ 0.85
VRK2Q86Y07 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
VRK2Q86Y07 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
VRK2Q86Y07 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VRK2Q86Y07 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VRK2Q86Y07 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VRK2Q86Y07 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VRK2Q86Y07 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VRK2Q86Y07 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.35■□□□□ 0.85
VRK2Q86Y07 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.35■□□□□ 0.85
VRK2Q86Y07 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.35■□□□□ 0.85
VRK2Q86Y07 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VRK2Q86Y07 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.35■□□□□ 0.85
VRK2Q86Y07 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VRK2Q86Y07 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VRK2Q86Y07 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VRK2Q86Y07 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
VRK2Q86Y07 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK2Q86Y07 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK2Q86Y07 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK2Q86Y07 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK2Q86Y07 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VRK2Q86Y07 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK2Q86Y07 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.34■□□□□ 0.85
VRK2Q86Y07 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.34■□□□□ 0.85
VRK2Q86Y07 AL117332.1-201ENST00000622628 974 ntBASIC20.34■□□□□ 0.85
VRK2Q86Y07 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VRK2Q86Y07 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VRK2Q86Y07 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VRK2Q86Y07 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VRK2Q86Y07 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
VRK2Q86Y07 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.33■□□□□ 0.85
VRK2Q86Y07 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VRK2Q86Y07 LINC01960-201ENST00000563759 1884 ntBASIC20.33■□□□□ 0.85
VRK2Q86Y07 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VRK2Q86Y07 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.33■□□□□ 0.85
VRK2Q86Y07 GUSBP5-201ENST00000418136 578 ntBASIC20.33■□□□□ 0.85
VRK2Q86Y07 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.33■□□□□ 0.85
VRK2Q86Y07 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VRK2Q86Y07 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VRK2Q86Y07 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
VRK2Q86Y07 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms