Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 AC004687.1-201ENST00000579003 1625 ntBASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1LQ86WJ1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
CHD1LQ86WJ1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
CHD1LQ86WJ1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CHD1LQ86WJ1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CHD1LQ86WJ1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD1LQ86WJ1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHD1LQ86WJ1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD1LQ86WJ1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.32■■□□□ 1.96
CHD1LQ86WJ1 AL117332.1-201ENST00000622628 974 ntBASIC27.32■■□□□ 1.96
CHD1LQ86WJ1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHD1LQ86WJ1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD1LQ86WJ1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.31■■□□□ 1.96
CHD1LQ86WJ1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 LINC01960-201ENST00000563759 1884 ntBASIC27.3■■□□□ 1.96
CHD1LQ86WJ1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD1LQ86WJ1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 AL499627.2-201ENST00000606283 725 ntBASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1LQ86WJ1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1LQ86WJ1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
CHD1LQ86WJ1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1LQ86WJ1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.26■■□□□ 1.95
CHD1LQ86WJ1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1LQ86WJ1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1LQ86WJ1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1LQ86WJ1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.26■■□□□ 1.95
CHD1LQ86WJ1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC27.26■■□□□ 1.95
CHD1LQ86WJ1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1LQ86WJ1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1LQ86WJ1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
CHD1LQ86WJ1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.24■■□□□ 1.95
CHD1LQ86WJ1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1LQ86WJ1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CHD1LQ86WJ1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1LQ86WJ1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1LQ86WJ1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms