Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX53Q86TM3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX53Q86TM3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX53Q86TM3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
DDX53Q86TM3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX53Q86TM3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX53Q86TM3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 TPRG1LP1-201ENST00000598702 760 ntBASIC23.57■■□□□ 1.36
DDX53Q86TM3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX53Q86TM3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX53Q86TM3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX53Q86TM3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 AC068587.7-201ENST00000641602 218 ntBASIC23.56■■□□□ 1.36
DDX53Q86TM3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX53Q86TM3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 ID1-201ENST00000376105 1233 ntBASIC23.55■■□□□ 1.36
DDX53Q86TM3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 AC004687.1-201ENST00000579003 1625 ntBASIC23.53■■□□□ 1.36
DDX53Q86TM3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 KRT18P61-201ENST00000585825 1298 ntBASIC23.53■■□□□ 1.36
DDX53Q86TM3 LINC00543-201ENST00000567234 1845 ntBASIC23.53■■□□□ 1.36
DDX53Q86TM3 AC079630.1-202ENST00000618127 1840 ntBASIC23.53■■□□□ 1.36
DDX53Q86TM3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX53Q86TM3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
DDX53Q86TM3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX53Q86TM3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX53Q86TM3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX53Q86TM3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX53Q86TM3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX53Q86TM3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
DDX53Q86TM3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
DDX53Q86TM3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX53Q86TM3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 AC006015.1-201ENST00000429970 570 ntBASIC23.51■■□□□ 1.35
DDX53Q86TM3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX53Q86TM3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 AC020928.2-201ENST00000588717 2197 ntBASIC23.51■■□□□ 1.35
DDX53Q86TM3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 BX005040.4-201ENST00000637145 1518 ntBASIC23.5■■□□□ 1.35
DDX53Q86TM3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms