Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX53Q86TM3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX53Q86TM3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX53Q86TM3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
DDX53Q86TM3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX53Q86TM3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX53Q86TM3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 TPRG1LP1-201ENST00000598702 760 ntBASIC23.57■■□□□ 1.36
DDX53Q86TM3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX53Q86TM3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX53Q86TM3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX53Q86TM3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX53Q86TM3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 AC068587.7-201ENST00000641602 218 ntBASIC23.56■■□□□ 1.36
DDX53Q86TM3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX53Q86TM3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
DDX53Q86TM3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 ID1-201ENST00000376105 1233 ntBASIC23.55■■□□□ 1.36
DDX53Q86TM3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX53Q86TM3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX53Q86TM3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX53Q86TM3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX53Q86TM3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 AC004687.1-201ENST00000579003 1625 ntBASIC23.53■■□□□ 1.36
DDX53Q86TM3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 KRT18P61-201ENST00000585825 1298 ntBASIC23.53■■□□□ 1.36
DDX53Q86TM3 LINC00543-201ENST00000567234 1845 ntBASIC23.53■■□□□ 1.36
DDX53Q86TM3 AC079630.1-202ENST00000618127 1840 ntBASIC23.53■■□□□ 1.36
DDX53Q86TM3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX53Q86TM3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
DDX53Q86TM3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX53Q86TM3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
DDX53Q86TM3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX53Q86TM3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX53Q86TM3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX53Q86TM3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX53Q86TM3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX53Q86TM3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
DDX53Q86TM3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
DDX53Q86TM3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX53Q86TM3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 AC006015.1-201ENST00000429970 570 ntBASIC23.51■■□□□ 1.35
DDX53Q86TM3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX53Q86TM3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
DDX53Q86TM3 AC020928.2-201ENST00000588717 2197 ntBASIC23.51■■□□□ 1.35
DDX53Q86TM3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 BX005040.4-201ENST00000637145 1518 ntBASIC23.5■■□□□ 1.35
DDX53Q86TM3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms