Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHFQ7M4L6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SHFQ7M4L6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.88■□□□□ 0.77
SHFQ7M4L6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHFQ7M4L6 AL024507.2-201ENST00000606070 2574 ntBASIC19.88■□□□□ 0.77
SHFQ7M4L6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHFQ7M4L6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SHFQ7M4L6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHFQ7M4L6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.87■□□□□ 0.77
SHFQ7M4L6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SHFQ7M4L6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHFQ7M4L6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHFQ7M4L6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHFQ7M4L6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHFQ7M4L6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHFQ7M4L6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHFQ7M4L6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.87■□□□□ 0.77
SHFQ7M4L6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.87■□□□□ 0.77
SHFQ7M4L6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHFQ7M4L6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHFQ7M4L6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.87■□□□□ 0.77
SHFQ7M4L6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SHFQ7M4L6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.87■□□□□ 0.77
SHFQ7M4L6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHFQ7M4L6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHFQ7M4L6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHFQ7M4L6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SHFQ7M4L6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHFQ7M4L6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.86■□□□□ 0.77
SHFQ7M4L6 AC087742.1-201ENST00000575880 1738 ntBASIC19.86■□□□□ 0.77
SHFQ7M4L6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SHFQ7M4L6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.86■□□□□ 0.77
SHFQ7M4L6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.86■□□□□ 0.77
SHFQ7M4L6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHFQ7M4L6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHFQ7M4L6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SHFQ7M4L6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SHFQ7M4L6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHFQ7M4L6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHFQ7M4L6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHFQ7M4L6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.85■□□□□ 0.77
SHFQ7M4L6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.85■□□□□ 0.77
SHFQ7M4L6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.85■□□□□ 0.77
SHFQ7M4L6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHFQ7M4L6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.85■□□□□ 0.77
SHFQ7M4L6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHFQ7M4L6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHFQ7M4L6 YBX1P4-201ENST00000392794 808 ntBASIC19.85■□□□□ 0.77
SHFQ7M4L6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.85■□□□□ 0.77
SHFQ7M4L6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHFQ7M4L6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHFQ7M4L6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHFQ7M4L6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHFQ7M4L6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SHFQ7M4L6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHFQ7M4L6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHFQ7M4L6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHFQ7M4L6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHFQ7M4L6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHFQ7M4L6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHFQ7M4L6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.84■□□□□ 0.77
SHFQ7M4L6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.84■□□□□ 0.77
SHFQ7M4L6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHFQ7M4L6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.84■□□□□ 0.77
SHFQ7M4L6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.84■□□□□ 0.77
SHFQ7M4L6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SHFQ7M4L6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SHFQ7M4L6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHFQ7M4L6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHFQ7M4L6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHFQ7M4L6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.83■□□□□ 0.77
SHFQ7M4L6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHFQ7M4L6 AL033527.3-201ENST00000566366 1196 ntBASIC19.83■□□□□ 0.77
SHFQ7M4L6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
SHFQ7M4L6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SHFQ7M4L6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.83■□□□□ 0.76
SHFQ7M4L6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHFQ7M4L6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.83■□□□□ 0.76
SHFQ7M4L6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHFQ7M4L6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHFQ7M4L6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHFQ7M4L6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHFQ7M4L6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHFQ7M4L6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.82■□□□□ 0.76
SHFQ7M4L6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SHFQ7M4L6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SHFQ7M4L6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SHFQ7M4L6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHFQ7M4L6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHFQ7M4L6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHFQ7M4L6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHFQ7M4L6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHFQ7M4L6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHFQ7M4L6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SHFQ7M4L6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SHFQ7M4L6 AC103834.1-201ENST00000520383 144 ntBASIC19.81■□□□□ 0.76
SHFQ7M4L6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.81■□□□□ 0.76
SHFQ7M4L6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.81■□□□□ 0.76
SHFQ7M4L6 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.81■□□□□ 0.76
SHFQ7M4L6 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms