Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 STK32C-205ENST00000456004 607 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00575Q6W349 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00575Q6W349 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00575Q6W349 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00575Q6W349 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00575Q6W349 AC005229.4-201ENST00000610085 2198 ntBASIC13.98□□□□□ -0.17
LINC00575Q6W349 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC00575Q6W349 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LINC00575Q6W349 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC00575Q6W349 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00575Q6W349 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00575Q6W349 AC087742.1-201ENST00000575880 1738 ntBASIC13.97□□□□□ -0.17
LINC00575Q6W349 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00575Q6W349 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00575Q6W349 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00575Q6W349 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00575Q6W349 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00575Q6W349 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LINC00575Q6W349 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00575Q6W349 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 AL353803.4-201ENST00000565882 1934 ntBASIC13.96□□□□□ -0.17
LINC00575Q6W349 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 AC026202.3-201ENST00000600805 1127 ntBASIC13.96□□□□□ -0.17
LINC00575Q6W349 RAP2CP1-202ENST00000605179 643 ntBASIC13.96□□□□□ -0.17
LINC00575Q6W349 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00575Q6W349 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00575Q6W349 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC00575Q6W349 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC00575Q6W349 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00575Q6W349 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00575Q6W349 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00575Q6W349 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00575Q6W349 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 AL592295.1-201ENST00000400984 884 ntBASIC13.95□□□□□ -0.18
LINC00575Q6W349 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 GFER-205ENST00000569451 517 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 METRNL-202ENST00000570778 967 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00575Q6W349 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00575Q6W349 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00575Q6W349 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00575Q6W349 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00575Q6W349 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00575Q6W349 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00575Q6W349 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00575Q6W349 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00575Q6W349 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00575Q6W349 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00575Q6W349 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC00575Q6W349 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC00575Q6W349 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00575Q6W349 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00575Q6W349 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00575Q6W349 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00575Q6W349 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 AC092667.1-201ENST00000434301 2586 ntBASIC13.93□□□□□ -0.18
LINC00575Q6W349 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
LINC00575Q6W349 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 ZNRF2P2-203ENST00000454624 420 ntBASIC13.93□□□□□ -0.18
LINC00575Q6W349 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00575Q6W349 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00575Q6W349 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 AC131274.2-201ENST00000580697 1507 ntBASIC13.93□□□□□ -0.18
LINC00575Q6W349 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00575Q6W349 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00575Q6W349 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00575Q6W349 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00575Q6W349 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00575Q6W349 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00575Q6W349 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00575Q6W349 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms