Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YER085CYER085C 522 nt5.04□□□□□ -1.6
SSL2Q00578 YLR042CYLR042C 486 nt5.04□□□□□ -1.6
SSL2Q00578 YLR049CYLR049C 1287 nt5.04□□□□□ -1.6
SSL2Q00578 YLR163W-AYLR163W-A 114 nt5.04□□□□□ -1.6
SSL2Q00578 TPP1YMR156C 717 nt5.04□□□□□ -1.6
SSL2Q00578 BUD17YNR027W 954 nt5.04□□□□□ -1.6
SSL2Q00578 YBR013CYBR013C 390 nt5.04□□□□□ -1.6
SSL2Q00578 SET6YPL165C 1122 nt5.04□□□□□ -1.6
SSL2Q00578 ARO4YBR249C 1113 nt5.04□□□□□ -1.6
SSL2Q00578 NOP8YOL144W 1455 nt5.04□□□□□ -1.6
SSL2Q00578 MSC2YDR205W 2175 nt5.04□□□□□ -1.6
SSL2Q00578 SEC9YGR009C 1956 nt5.04□□□□□ -1.6
SSL2Q00578 SIR1YKR101W 1965 nt5.04□□□□□ -1.6
SSL2Q00578 tK(CUU)CtK(CUU)C 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)D1tK(CUU)D1 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)D2tK(CUU)D2 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)E1tK(CUU)E1 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)E2tK(CUU)E2 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)FtK(CUU)F 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)G1tK(CUU)G1 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)G2tK(CUU)G2 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)G3tK(CUU)G3 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)ItK(CUU)I 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)JtK(CUU)J 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)KtK(CUU)K 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)MtK(CUU)M 73 nt5.03□□□□□ -1.6
SSL2Q00578 tK(CUU)PtK(CUU)P 73 nt5.03□□□□□ -1.6
SSL2Q00578 YFR057WYFR057W 456 nt5.03□□□□□ -1.6
SSL2Q00578 PER33YLR064W 822 nt5.03□□□□□ -1.6
SSL2Q00578 YMR084WYMR084W 789 nt5.03□□□□□ -1.6
SSL2Q00578 UBP8YMR223W 1416 nt5.03□□□□□ -1.6
SSL2Q00578 PDR15YDR406W 4590 nt5.03□□□□□ -1.6
SSL2Q00578 NUP116YMR047C 3342 nt5.03□□□□□ -1.6
SSL2Q00578 STB3YDR169C 1542 nt5.02□□□□□ -1.61
SSL2Q00578 SFI1YLL003W 2841 nt5.02□□□□□ -1.61
SSL2Q00578 ZRC1YMR243C 1329 nt5.02□□□□□ -1.61
SSL2Q00578 PER1YCR044C 1074 nt5.02□□□□□ -1.61
SSL2Q00578 YDR056CYDR056C 618 nt5.02□□□□□ -1.61
SSL2Q00578 CIA2YHR122W 696 nt5.02□□□□□ -1.61
SSL2Q00578 COA3YJL062W-A 258 nt5.02□□□□□ -1.61
SSL2Q00578 POP8YBL018C 402 nt5.02□□□□□ -1.61
SSL2Q00578 FEX1YOR390W 1128 nt5.02□□□□□ -1.61
SSL2Q00578 FEX2YPL279C 1128 nt5.02□□□□□ -1.61
SSL2Q00578 YPR142CYPR142C 564 nt5.02□□□□□ -1.61
SSL2Q00578 RAD16YBR114W 2373 nt5.02□□□□□ -1.61
SSL2Q00578 LEU1YGL009C 2340 nt5.02□□□□□ -1.61
SSL2Q00578 SAP4YGL229C 2457 nt5.02□□□□□ -1.61
SSL2Q00578 SWI3YJL176C 2478 nt5.02□□□□□ -1.61
SSL2Q00578 GAL4YPL248C 2646 nt5.02□□□□□ -1.61
SSL2Q00578 CBF5YLR175W 1452 nt5.01□□□□□ -1.61
SSL2Q00578 HMS1YOR032C 1305 nt5.01□□□□□ -1.61
SSL2Q00578 KIC1YHR102W 3243 nt5.01□□□□□ -1.61
SSL2Q00578 HIR2YOR038C 2628 nt5.01□□□□□ -1.61
SSL2Q00578 PXA1YPL147W 2613 nt5.01□□□□□ -1.61
SSL2Q00578 YDL124WYDL124W 939 nt5.01□□□□□ -1.61
SSL2Q00578 TRM8YDL201W 861 nt5.01□□□□□ -1.61
SSL2Q00578 DET1YDR051C 1005 nt5.01□□□□□ -1.61
SSL2Q00578 RPL34AYER056C-A 366 nt5.01□□□□□ -1.61
SSL2Q00578 BTN2YGR142W 1233 nt5.01□□□□□ -1.61
SSL2Q00578 IZH4YOL101C 939 nt5.01□□□□□ -1.61
SSL2Q00578 IAH1YOR126C 717 nt5.01□□□□□ -1.61
SSL2Q00578 TGS1YPL157W 948 nt5.01□□□□□ -1.61
SSL2Q00578 RPG1YBR079C 2895 nt5.01□□□□□ -1.61
SSL2Q00578 YDR098C-AYDR098C-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YDR210C-CYDR210C-C 1323 nt5□□□□□ -1.61
SSL2Q00578 YDR261C-CYDR261C-C 1323 nt5□□□□□ -1.61
SSL2Q00578 YDR316W-AYDR316W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YDR365W-AYDR365W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YER137C-AYER137C-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YER159C-AYER159C-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YGR027W-AYGR027W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YGR038C-AYGR038C-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YGR161C-CYGR161C-C 1323 nt5□□□□□ -1.61
SSL2Q00578 YJR026WYJR026W 1323 nt5□□□□□ -1.61
SSL2Q00578 YJR028WYJR028W 1323 nt5□□□□□ -1.61
SSL2Q00578 YAR010CYAR010C 1323 nt5□□□□□ -1.61
SSL2Q00578 YLR157C-AYLR157C-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YLR227W-AYLR227W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YLR256W-AYLR256W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YML040WYML040W 1323 nt5□□□□□ -1.61
SSL2Q00578 YML045W-AYML045W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YMR051CYMR051C 1323 nt5□□□□□ -1.61
SSL2Q00578 YNL054W-AYNL054W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YOL103W-AYOL103W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YPL257W-AYPL257W-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YPR137C-AYPR137C-A 1323 nt5□□□□□ -1.61
SSL2Q00578 YPR158C-CYPR158C-C 1323 nt5□□□□□ -1.61
SSL2Q00578 RGP1YDR137W 1992 nt5□□□□□ -1.61
SSL2Q00578 HIS4YCL030C 2400 nt5□□□□□ -1.61
SSL2Q00578 YFL019CYFL019C 354 nt5□□□□□ -1.61
SSL2Q00578 PSF2YJL072C 642 nt5□□□□□ -1.61
SSL2Q00578 LSO1YJR005C-A 282 nt5□□□□□ -1.61
SSL2Q00578 YJR071WYJR071W 369 nt5□□□□□ -1.61
SSL2Q00578 MTD1YKR080W 963 nt5□□□□□ -1.61
SSL2Q00578 SMD2YLR275W 333 nt5□□□□□ -1.61
SSL2Q00578 SEC72YLR292C 582 nt5□□□□□ -1.61
SSL2Q00578 YBL068W-AYBL068W-A 237 nt5□□□□□ -1.61
SSL2Q00578 RFM1YOR279C 933 nt5□□□□□ -1.61
SSL2Q00578 ALG6YOR002W 1635 nt5□□□□□ -1.61
SSL2Q00578 TRE1YPL176C 2352 nt5□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms