Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEC61A1P61619 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEC61A1P61619 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC61A1P61619 AC004448.1-201ENST00000458332 883 ntBASIC19.16■□□□□ 0.66
SEC61A1P61619 AC131281.2-201ENST00000520478 145 ntBASIC19.16■□□□□ 0.66
SEC61A1P61619 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.16■□□□□ 0.66
SEC61A1P61619 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.16■□□□□ 0.66
SEC61A1P61619 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.16■□□□□ 0.66
SEC61A1P61619 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.16■□□□□ 0.66
SEC61A1P61619 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC61A1P61619 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEC61A1P61619 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SEC61A1P61619 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEC61A1P61619 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC61A1P61619 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SEC61A1P61619 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.15■□□□□ 0.66
SEC61A1P61619 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.15■□□□□ 0.66
SEC61A1P61619 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.15■□□□□ 0.66
SEC61A1P61619 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.15■□□□□ 0.66
SEC61A1P61619 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.15■□□□□ 0.66
SEC61A1P61619 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.15■□□□□ 0.66
SEC61A1P61619 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.15■□□□□ 0.66
SEC61A1P61619 MIR3621-201ENST00000580529 85 ntBASIC19.15■□□□□ 0.66
SEC61A1P61619 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.15■□□□□ 0.66
SEC61A1P61619 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SEC61A1P61619 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SEC61A1P61619 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SEC61A1P61619 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SEC61A1P61619 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61A1P61619 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SEC61A1P61619 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SEC61A1P61619 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.14■□□□□ 0.66
SEC61A1P61619 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SEC61A1P61619 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEC61A1P61619 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SEC61A1P61619 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.14■□□□□ 0.65
SEC61A1P61619 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEC61A1P61619 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.14■□□□□ 0.65
SEC61A1P61619 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.14■□□□□ 0.65
SEC61A1P61619 MIR6722-201ENST00000617286 78 ntBASIC19.14■□□□□ 0.65
SEC61A1P61619 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEC61A1P61619 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEC61A1P61619 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.14■□□□□ 0.65
SEC61A1P61619 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEC61A1P61619 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.14■□□□□ 0.65
SEC61A1P61619 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SEC61A1P61619 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SEC61A1P61619 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SEC61A1P61619 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.13■□□□□ 0.65
SEC61A1P61619 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SEC61A1P61619 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEC61A1P61619 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.13■□□□□ 0.65
SEC61A1P61619 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.13■□□□□ 0.65
SEC61A1P61619 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEC61A1P61619 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEC61A1P61619 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEC61A1P61619 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.13■□□□□ 0.65
SEC61A1P61619 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SEC61A1P61619 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEC61A1P61619 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.12■□□□□ 0.65
SEC61A1P61619 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.12■□□□□ 0.65
SEC61A1P61619 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SEC61A1P61619 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SEC61A1P61619 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SEC61A1P61619 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.12■□□□□ 0.65
SEC61A1P61619 AL356740.2-201ENST00000601559 647 ntBASIC19.12■□□□□ 0.65
SEC61A1P61619 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEC61A1P61619 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEC61A1P61619 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEC61A1P61619 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.11■□□□□ 0.65
SEC61A1P61619 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 AL161729.1-201ENST00000604104 1402 ntBASIC19.11■□□□□ 0.65
SEC61A1P61619 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SEC61A1P61619 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SEC61A1P61619 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.11■□□□□ 0.65
SEC61A1P61619 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.11■□□□□ 0.65
SEC61A1P61619 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.11■□□□□ 0.65
SEC61A1P61619 AL121603.2-201ENST00000557373 2117 ntBASIC19.11■□□□□ 0.65
SEC61A1P61619 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.11■□□□□ 0.65
SEC61A1P61619 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.11■□□□□ 0.65
SEC61A1P61619 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61A1P61619 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SEC61A1P61619 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms