Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2NP61088 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.36■□□□□ 0.69
UBE2NP61088 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.36■□□□□ 0.69
UBE2NP61088 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE2NP61088 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
UBE2NP61088 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE2NP61088 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE2NP61088 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2NP61088 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2NP61088 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2NP61088 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2NP61088 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2NP61088 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2NP61088 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2NP61088 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
UBE2NP61088 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBE2NP61088 AC004687.1-201ENST00000579003 1625 ntBASIC19.35■□□□□ 0.69
UBE2NP61088 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2NP61088 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE2NP61088 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2NP61088 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2NP61088 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2NP61088 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.34■□□□□ 0.69
UBE2NP61088 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.34■□□□□ 0.69
UBE2NP61088 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2NP61088 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2NP61088 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
UBE2NP61088 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2NP61088 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE2NP61088 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2NP61088 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
UBE2NP61088 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2NP61088 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2NP61088 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2NP61088 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2NP61088 BX842568.3-201ENST00000418104 571 ntBASIC19.33■□□□□ 0.68
UBE2NP61088 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.33■□□□□ 0.68
UBE2NP61088 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.33■□□□□ 0.68
UBE2NP61088 AC027682.1-201ENST00000562846 899 ntBASIC19.33■□□□□ 0.68
UBE2NP61088 AC008764.7-201ENST00000593779 1081 ntBASIC19.33■□□□□ 0.68
UBE2NP61088 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.33■□□□□ 0.68
UBE2NP61088 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE2NP61088 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
UBE2NP61088 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.33■□□□□ 0.68
UBE2NP61088 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2NP61088 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UBE2NP61088 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2NP61088 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBE2NP61088 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2NP61088 AF213884.3-201ENST00000563833 479 ntBASIC19.32■□□□□ 0.68
UBE2NP61088 AC233992.3-201ENST00000607491 485 ntBASIC19.32■□□□□ 0.68
UBE2NP61088 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2NP61088 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBE2NP61088 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
UBE2NP61088 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBE2NP61088 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBE2NP61088 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBE2NP61088 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE2NP61088 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
UBE2NP61088 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE2NP61088 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2NP61088 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2NP61088 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2NP61088 OR2I1P-207ENST00000453522 948 ntBASIC19.31■□□□□ 0.68
UBE2NP61088 AC091305.1-201ENST00000479476 895 ntBASIC19.31■□□□□ 0.68
UBE2NP61088 AP001330.3-201ENST00000520123 633 ntBASIC19.31■□□□□ 0.68
UBE2NP61088 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBE2NP61088 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE2NP61088 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE2NP61088 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
UBE2NP61088 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2NP61088 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2NP61088 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2NP61088 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2NP61088 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE2NP61088 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2NP61088 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBE2NP61088 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2NP61088 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2NP61088 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2NP61088 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2NP61088 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBE2NP61088 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE2NP61088 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2NP61088 DUSP8P3-201ENST00000399571 1760 ntBASIC19.3■□□□□ 0.68
UBE2NP61088 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE2NP61088 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UBE2NP61088 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE2NP61088 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms