Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN6P56747 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN6P56747 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN6P56747 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN6P56747 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.29■■□□□ 1
CLDN6P56747 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.29■■□□□ 1
CLDN6P56747 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.29■■□□□ 1
CLDN6P56747 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLDN6P56747 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.29■■□□□ 1
CLDN6P56747 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.29■■□□□ 1
CLDN6P56747 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.29■■□□□ 1
CLDN6P56747 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN6P56747 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.29■■□□□ 1
CLDN6P56747 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.29■■□□□ 1
CLDN6P56747 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN6P56747 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN6P56747 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.28■■□□□ 1
CLDN6P56747 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.28■■□□□ 1
CLDN6P56747 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CLDN6P56747 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.28■■□□□ 1
CLDN6P56747 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN6P56747 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.28■■□□□ 1
CLDN6P56747 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN6P56747 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.28■■□□□ 1
CLDN6P56747 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.28■■□□□ 1
CLDN6P56747 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CLDN6P56747 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.28■■□□□ 1
CLDN6P56747 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN6P56747 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN6P56747 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.28■■□□□ 1
CLDN6P56747 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN6P56747 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.27■■□□□ 1
CLDN6P56747 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN6P56747 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN6P56747 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN6P56747 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.27■■□□□ 1
CLDN6P56747 AC006970.2-201ENST00000450065 779 ntBASIC21.27■■□□□ 1
CLDN6P56747 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.27■■□□□ 1
CLDN6P56747 BID-214ENST00000617586 542 ntTSL 5 BASIC21.27■■□□□ 1
CLDN6P56747 AL109923.1-201ENST00000618799 583 ntBASIC21.27■■□□□ 1
CLDN6P56747 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN6P56747 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN6P56747 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
CLDN6P56747 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN6P56747 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN6P56747 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN6P56747 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN6P56747 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN6P56747 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN6P56747 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN6P56747 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN6P56747 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CLDN6P56747 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN6P56747 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN6P56747 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.26■□□□□ 0.99
CLDN6P56747 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.26■□□□□ 0.99
CLDN6P56747 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.26■□□□□ 0.99
CLDN6P56747 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLDN6P56747 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN6P56747 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CLDN6P56747 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN6P56747 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN6P56747 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.25■□□□□ 0.99
CLDN6P56747 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN6P56747 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.25■□□□□ 0.99
CLDN6P56747 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.25■□□□□ 0.99
CLDN6P56747 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN6P56747 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN6P56747 AC022211.4-201ENST00000625094 2161 ntBASIC21.25■□□□□ 0.99
CLDN6P56747 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.25■□□□□ 0.99
CLDN6P56747 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.25■□□□□ 0.99
CLDN6P56747 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 FP325331.1-202ENST00000623531 1380 ntBASIC21.24■□□□□ 0.99
CLDN6P56747 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.24■□□□□ 0.99
CLDN6P56747 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.24■□□□□ 0.99
CLDN6P56747 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.24■□□□□ 0.99
CLDN6P56747 AC011767.1-201ENST00000617410 1153 ntBASIC21.24■□□□□ 0.99
CLDN6P56747 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLDN6P56747 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN6P56747 LINC01529-204ENST00000636474 1715 ntBASIC21.24■□□□□ 0.99
CLDN6P56747 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CLDN6P56747 AC144652.1-201ENST00000609974 1624 ntBASIC21.23■□□□□ 0.99
CLDN6P56747 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.23■□□□□ 0.99
CLDN6P56747 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms