Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC6A12P48065 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC6A12P48065 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC6A12P48065 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC6A12P48065 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC6A12P48065 ECEL1P1-201ENST00000373592 1742 ntBASIC21.38■■□□□ 1.01
SLC6A12P48065 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC6A12P48065 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC6A12P48065 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC6A12P48065 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SLC6A12P48065 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC6A12P48065 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC6A12P48065 SRD5A1P1-201ENST00000442297 786 ntBASIC21.37■■□□□ 1.01
SLC6A12P48065 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.37■■□□□ 1.01
SLC6A12P48065 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC6A12P48065 MIR4466-201ENST00000606121 54 ntBASIC21.37■■□□□ 1.01
SLC6A12P48065 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC6A12P48065 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC6A12P48065 LINC01960-201ENST00000563759 1884 ntBASIC21.37■■□□□ 1.01
SLC6A12P48065 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SLC6A12P48065 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC6A12P48065 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A12P48065 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A12P48065 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC6A12P48065 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC6A12P48065 pRNA.6-201ENST00000610482 90 ntBASIC21.36■■□□□ 1.01
SLC6A12P48065 pRNA.5-201ENST00000612139 90 ntBASIC21.36■■□□□ 1.01
SLC6A12P48065 pRNA.11-201ENST00000618423 90 ntBASIC21.36■■□□□ 1.01
SLC6A12P48065 pRNA.13-201ENST00000619112 90 ntBASIC21.36■■□□□ 1.01
SLC6A12P48065 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A12P48065 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A12P48065 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A12P48065 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC6A12P48065 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC6A12P48065 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A12P48065 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SLC6A12P48065 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A12P48065 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC6A12P48065 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC6A12P48065 AC131281.2-201ENST00000520478 145 ntBASIC21.35■■□□□ 1.01
SLC6A12P48065 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC6A12P48065 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.35■■□□□ 1.01
SLC6A12P48065 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SLC6A12P48065 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC6A12P48065 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC6A12P48065 AC242852.2-201ENST00000615738 1807 ntBASIC21.34■■□□□ 1.01
SLC6A12P48065 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC6A12P48065 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC6A12P48065 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC6A12P48065 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC6A12P48065 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SLC6A12P48065 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC6A12P48065 AC133637.1-201ENST00000624115 1537 ntBASIC21.34■■□□□ 1.01
SLC6A12P48065 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC6A12P48065 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC6A12P48065 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A12P48065 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
SLC6A12P48065 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A12P48065 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A12P48065 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A12P48065 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A12P48065 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A12P48065 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A12P48065 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC6A12P48065 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SLC6A12P48065 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.33■■□□□ 1
SLC6A12P48065 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A12P48065 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A12P48065 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.32■■□□□ 1
SLC6A12P48065 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
SLC6A12P48065 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SLC6A12P48065 EP400NL-214ENST00000641289 2402 ntBASIC21.32■■□□□ 1
SLC6A12P48065 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.32■■□□□ 1
SLC6A12P48065 MIR3181-201ENST00000578512 73 ntBASIC21.32■■□□□ 1
SLC6A12P48065 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SLC6A12P48065 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC6A12P48065 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.32■■□□□ 1
SLC6A12P48065 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC6A12P48065 LINC00526-201ENST00000581067 1875 ntBASIC21.32■■□□□ 1
SLC6A12P48065 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A12P48065 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SLC6A12P48065 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SLC6A12P48065 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A12P48065 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A12P48065 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.31■■□□□ 1
SLC6A12P48065 AC092171.4-201ENST00000609130 632 ntBASIC21.31■■□□□ 1
SLC6A12P48065 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.31■■□□□ 1
SLC6A12P48065 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A12P48065 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A12P48065 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A12P48065 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.3■■□□□ 1
SLC6A12P48065 AC139530.1-201ENST00000575312 1977 ntBASIC21.3■■□□□ 1
SLC6A12P48065 AC080038.3-201ENST00000623346 1952 ntBASIC21.3■■□□□ 1
SLC6A12P48065 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.3■■□□□ 1
SLC6A12P48065 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC6A12P48065 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A12P48065 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLC6A12P48065 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC6A12P48065 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.3■■□□□ 1
SLC6A12P48065 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms