Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 TCB1YOR086C 3561 nt6.56□□□□□ -1.36
TY1A-JR2P47099 MDM38YOL027C 1722 nt6.56□□□□□ -1.36
TY1A-JR2P47099 BUD27YFL023W 2391 nt6.55□□□□□ -1.36
TY1A-JR2P47099 ALG6YOR002W 1635 nt6.55□□□□□ -1.36
TY1A-JR2P47099 SEC18YBR080C 2277 nt6.55□□□□□ -1.36
TY1A-JR2P47099 GPI19YDR437W 423 nt6.55□□□□□ -1.36
TY1A-JR2P47099 YGL039WYGL039W 1047 nt6.55□□□□□ -1.36
TY1A-JR2P47099 HIS6YIL020C 786 nt6.55□□□□□ -1.36
TY1A-JR2P47099 COQ10YOL008W 624 nt6.55□□□□□ -1.36
TY1A-JR2P47099 COQ3YOL096C 939 nt6.55□□□□□ -1.36
TY1A-JR2P47099 RSP5YER125W 2430 nt6.55□□□□□ -1.36
TY1A-JR2P47099 NGR1YBR212W 2019 nt6.54□□□□□ -1.36
TY1A-JR2P47099 YDR491CYDR491C 492 nt6.54□□□□□ -1.36
TY1A-JR2P47099 GCN4YEL009C 846 nt6.54□□□□□ -1.36
TY1A-JR2P47099 HHY1YEL059W 309 nt6.54□□□□□ -1.36
TY1A-JR2P47099 AAD16YFL057C 459 nt6.54□□□□□ -1.36
TY1A-JR2P47099 NAT2YGR147C 867 nt6.54□□□□□ -1.36
TY1A-JR2P47099 RRP4YHR069C 1080 nt6.54□□□□□ -1.36
TY1A-JR2P47099 YIR035CYIR035C 765 nt6.54□□□□□ -1.36
TY1A-JR2P47099 APN1YKL114C 1104 nt6.54□□□□□ -1.36
TY1A-JR2P47099 VPS65YLR322W 315 nt6.54□□□□□ -1.36
TY1A-JR2P47099 CTK3YML112W 891 nt6.54□□□□□ -1.36
TY1A-JR2P47099 ZPS1YOL154W 750 nt6.54□□□□□ -1.36
TY1A-JR2P47099 YPL225WYPL225W 441 nt6.54□□□□□ -1.36
TY1A-JR2P47099 YOP1YPR028W 543 nt6.54□□□□□ -1.36
TY1A-JR2P47099 HNM1YGL077C 1692 nt6.54□□□□□ -1.36
TY1A-JR2P47099 MDM34YGL219C 1380 nt6.54□□□□□ -1.36
TY1A-JR2P47099 RQC1YDR333C 2172 nt6.54□□□□□ -1.36
TY1A-JR2P47099 DAL7YIR031C 1665 nt6.53□□□□□ -1.36
TY1A-JR2P47099 PHR1YOR386W 1698 nt6.53□□□□□ -1.36
TY1A-JR2P47099 PER1YCR044C 1074 nt6.53□□□□□ -1.36
TY1A-JR2P47099 ATP8Q0080 147 nt6.53□□□□□ -1.36
TY1A-JR2P47099 GRX2YDR513W 432 nt6.53□□□□□ -1.36
TY1A-JR2P47099 MAG1YER142C 891 nt6.53□□□□□ -1.36
TY1A-JR2P47099 YGL015CYGL015C 393 nt6.53□□□□□ -1.36
TY1A-JR2P47099 SPL2YHR136C 447 nt6.53□□□□□ -1.36
TY1A-JR2P47099 TES1YJR019C 1050 nt6.53□□□□□ -1.36
TY1A-JR2P47099 IMP2YMR035W 534 nt6.53□□□□□ -1.36
TY1A-JR2P47099 ECM30YLR436C 3825 nt6.53□□□□□ -1.36
TY1A-JR2P47099 KIN1YDR122W 3195 nt6.53□□□□□ -1.36
TY1A-JR2P47099 YRB30YGL164C 1323 nt6.52□□□□□ -1.37
TY1A-JR2P47099 AFG3YER017C 2286 nt6.52□□□□□ -1.37
TY1A-JR2P47099 QRI1YDL103C 1434 nt6.52□□□□□ -1.37
TY1A-JR2P47099 SKY1YMR216C 2229 nt6.52□□□□□ -1.37
TY1A-JR2P47099 YDR149CYDR149C 708 nt6.52□□□□□ -1.37
TY1A-JR2P47099 VMA8YEL051W 771 nt6.52□□□□□ -1.37
TY1A-JR2P47099 CHZ1YER030W 462 nt6.52□□□□□ -1.37
TY1A-JR2P47099 THO1YER063W 657 nt6.52□□□□□ -1.37
TY1A-JR2P47099 YIL025CYIL025C 375 nt6.52□□□□□ -1.37
TY1A-JR2P47099 YBL008W-AYBL008W-A 240 nt6.52□□□□□ -1.37
TY1A-JR2P47099 YNL019CYNL019C 855 nt6.52□□□□□ -1.37
TY1A-JR2P47099 YNL033WYNL033W 855 nt6.52□□□□□ -1.37
TY1A-JR2P47099 RRT16YNL105W 429 nt6.52□□□□□ -1.37
TY1A-JR2P47099 RPL19AYBR084C-A 570 nt6.52□□□□□ -1.37
TY1A-JR2P47099 LEO1YOR123C 1395 nt6.52□□□□□ -1.37
TY1A-JR2P47099 FAD1YDL045C 921 nt6.51□□□□□ -1.37
TY1A-JR2P47099 BNA7YDR428C 786 nt6.51□□□□□ -1.37
TY1A-JR2P47099 YGL006W-AYGL006W-A 111 nt6.51□□□□□ -1.37
TY1A-JR2P47099 MIG2YGL209W 1149 nt6.51□□□□□ -1.37
TY1A-JR2P47099 ECL1YGR146C 636 nt6.51□□□□□ -1.37
TY1A-JR2P47099 YKE4YIL023C 1041 nt6.51□□□□□ -1.37
TY1A-JR2P47099 YIR023C-AYIR023C-A 324 nt6.51□□□□□ -1.37
TY1A-JR2P47099 YKL066WYKL066W 444 nt6.51□□□□□ -1.37
TY1A-JR2P47099 YML012C-AYML012C-A 378 nt6.51□□□□□ -1.37
TY1A-JR2P47099 MRPL10YNL284C 969 nt6.51□□□□□ -1.37
TY1A-JR2P47099 MSS18YPR134W 807 nt6.51□□□□□ -1.37
TY1A-JR2P47099 YBR285WYBR285W 435 nt6.51□□□□□ -1.37
TY1A-JR2P47099 VPS17YOR132W 1656 nt6.51□□□□□ -1.37
TY1A-JR2P47099 WSC3YOL105C 1671 nt6.5□□□□□ -1.37
TY1A-JR2P47099 TRM12YML005W 1389 nt6.5□□□□□ -1.37
TY1A-JR2P47099 SWF1YDR126W 1011 nt6.5□□□□□ -1.37
TY1A-JR2P47099 YJR111CYJR111C 852 nt6.5□□□□□ -1.37
TY1A-JR2P47099 YML047W-AYML047W-A 366 nt6.5□□□□□ -1.37
TY1A-JR2P47099 RNA170RNA170 169 nt6.5□□□□□ -1.37
TY1A-JR2P47099 YPT11YNL304W 1254 nt6.5□□□□□ -1.37
TY1A-JR2P47099 PHO80YOL001W 882 nt6.5□□□□□ -1.37
TY1A-JR2P47099 YOR012WYOR012W 414 nt6.5□□□□□ -1.37
TY1A-JR2P47099 MCM16YPR046W 546 nt6.5□□□□□ -1.37
TY1A-JR2P47099 TRE2YOR256C 2430 nt6.5□□□□□ -1.37
TY1A-JR2P47099 CIT1YNR001C 1440 nt6.5□□□□□ -1.37
TY1A-JR2P47099 TEL2YGR099W 2067 nt6.49□□□□□ -1.37
TY1A-JR2P47099 COX10YPL172C 1389 nt6.49□□□□□ -1.37
TY1A-JR2P47099 APA2YDR530C 978 nt6.49□□□□□ -1.37
TY1A-JR2P47099 GET1YGL020C 708 nt6.49□□□□□ -1.37
TY1A-JR2P47099 YVH1YIR026C 1095 nt6.49□□□□□ -1.37
TY1A-JR2P47099 MDH1YKL085W 1005 nt6.49□□□□□ -1.37
TY1A-JR2P47099 YKL177WYKL177W 339 nt6.49□□□□□ -1.37
TY1A-JR2P47099 MEU1YLR017W 1014 nt6.49□□□□□ -1.37
TY1A-JR2P47099 ATP11YNL315C 957 nt6.49□□□□□ -1.37
TY1A-JR2P47099 HCA4YJL033W 2313 nt6.49□□□□□ -1.37
TY1A-JR2P47099 CAN1YEL063C 1773 nt6.49□□□□□ -1.37
TY1A-JR2P47099 ZRC1YMR243C 1329 nt6.49□□□□□ -1.37
TY1A-JR2P47099 YGR069WYGR069W 336 nt6.48□□□□□ -1.37
TY1A-JR2P47099 YAP5YIR018W 738 nt6.48□□□□□ -1.37
TY1A-JR2P47099 ACP1YKL192C 378 nt6.48□□□□□ -1.37
TY1A-JR2P47099 LOT6YLR011W 576 nt6.48□□□□□ -1.37
TY1A-JR2P47099 RLP7YNL002C 969 nt6.48□□□□□ -1.37
TY1A-JR2P47099 YNL035CYNL035C 1170 nt6.48□□□□□ -1.37
TY1A-JR2P47099 APN2YBL019W 1563 nt6.48□□□□□ -1.37
TY1A-JR2P47099 LYS21YDL131W 1323 nt6.48□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms