Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YGL199CYGL199C 471 nt5.91□□□□□ -1.46
MSH4P40965 YGR122WYGR122W 1209 nt5.91□□□□□ -1.46
MSH4P40965 VPS29YHR012W 849 nt5.91□□□□□ -1.46
MSH4P40965 HTD2YHR067W 843 nt5.91□□□□□ -1.46
MSH4P40965 PPX1YHR201C 1194 nt5.91□□□□□ -1.46
MSH4P40965 CKA1YIL035C 1119 nt5.91□□□□□ -1.46
MSH4P40965 REC102YLR329W 795 nt5.91□□□□□ -1.46
MSH4P40965 NRK1YNL129W 723 nt5.91□□□□□ -1.46
MSH4P40965 ARG4YHR018C 1392 nt5.91□□□□□ -1.46
MSH4P40965 ART10YLR392C 1557 nt5.9□□□□□ -1.46
MSH4P40965 CPR4YCR069W 957 nt5.9□□□□□ -1.46
MSH4P40965 CRD1YDL142C 852 nt5.9□□□□□ -1.46
MSH4P40965 ATC1YDR184C 885 nt5.9□□□□□ -1.46
MSH4P40965 MRPS35YGR165W 1038 nt5.9□□□□□ -1.46
MSH4P40965 RFC2YJR068W 1062 nt5.9□□□□□ -1.46
MSH4P40965 BAT2YJR148W 1131 nt5.9□□□□□ -1.46
MSH4P40965 CSR1YLR380W 1227 nt5.9□□□□□ -1.46
MSH4P40965 CDC73YLR418C 1182 nt5.9□□□□□ -1.46
MSH4P40965 YMR105W-AYMR105W-A 195 nt5.9□□□□□ -1.46
MSH4P40965 TPP1YMR156C 717 nt5.9□□□□□ -1.46
MSH4P40965 SUR1YPL057C 1149 nt5.9□□□□□ -1.46
MSH4P40965 AVT3YKL146W 2079 nt5.9□□□□□ -1.47
MSH4P40965 YNL011CYNL011C 1335 nt5.9□□□□□ -1.47
MSH4P40965 MRS2YOR334W 1413 nt5.9□□□□□ -1.47
MSH4P40965 RGP1YDR137W 1992 nt5.89□□□□□ -1.47
MSH4P40965 TOS3YGL179C 1683 nt5.89□□□□□ -1.47
MSH4P40965 YHR193C-AYHR193C-A 375 nt5.89□□□□□ -1.47
MSH4P40965 MTW1YAL034W-A 870 nt5.89□□□□□ -1.47
MSH4P40965 YKR041WYKR041W 753 nt5.89□□□□□ -1.47
MSH4P40965 ATG38YLR211C 681 nt5.89□□□□□ -1.47
MSH4P40965 YNL162W-AYNL162W-A 219 nt5.89□□□□□ -1.47
MSH4P40965 HMS1YOR032C 1305 nt5.89□□□□□ -1.47
MSH4P40965 UGA1YGR019W 1416 nt5.89□□□□□ -1.47
MSH4P40965 CDC4YFL009W 2340 nt5.88□□□□□ -1.47
MSH4P40965 CIK1YMR198W 1785 nt5.88□□□□□ -1.47
MSH4P40965 NGR1YBR212W 2019 nt5.88□□□□□ -1.47
MSH4P40965 YHR069C-AYHR069C-A 363 nt5.88□□□□□ -1.47
MSH4P40965 IRC9YJL142C 393 nt5.88□□□□□ -1.47
MSH4P40965 GSP1YLR293C 660 nt5.88□□□□□ -1.47
MSH4P40965 DLT1YMR126C 1029 nt5.88□□□□□ -1.47
MSH4P40965 HLJ1YMR161W 675 nt5.88□□□□□ -1.47
MSH4P40965 RPA49YNL248C 1248 nt5.88□□□□□ -1.47
MSH4P40965 YNR062CYNR062C 984 nt5.88□□□□□ -1.47
MSH4P40965 RPL21BYPL079W 483 nt5.88□□□□□ -1.47
MSH4P40965 YBR287WYBR287W 1284 nt5.88□□□□□ -1.47
MSH4P40965 YCL001W-AYCL001W-A 462 nt5.88□□□□□ -1.47
MSH4P40965 LAS21YJL062W 2493 nt5.88□□□□□ -1.47
MSH4P40965 BIT2YBR270C 1638 nt5.88□□□□□ -1.47
MSH4P40965 BRF1YGR246C 1791 nt5.88□□□□□ -1.47
MSH4P40965 FOL1YNL256W 2475 nt5.87□□□□□ -1.47
MSH4P40965 YER187WYER187W 426 nt5.87□□□□□ -1.47
MSH4P40965 YFL012W-AYFL012W-A 375 nt5.87□□□□□ -1.47
MSH4P40965 RPL24BYGR148C 468 nt5.87□□□□□ -1.47
MSH4P40965 EFG1YGR271C-A 702 nt5.87□□□□□ -1.47
MSH4P40965 CAB2YIL083C 1098 nt5.87□□□□□ -1.47
MSH4P40965 YJL218WYJL218W 591 nt5.87□□□□□ -1.47
MSH4P40965 BOS1YLR078C 735 nt5.87□□□□□ -1.47
MSH4P40965 SPS19YNL202W 879 nt5.87□□□□□ -1.47
MSH4P40965 MDJ2YNL328C 441 nt5.87□□□□□ -1.47
MSH4P40965 HNT3YOR258W 654 nt5.87□□□□□ -1.47
MSH4P40965 ARA1YBR149W 1035 nt5.87□□□□□ -1.47
MSH4P40965 COM2YER130C 1332 nt5.87□□□□□ -1.47
MSH4P40965 PDI1YCL043C 1569 nt5.87□□□□□ -1.47
MSH4P40965 ASK10YGR097W 3441 nt5.86□□□□□ -1.47
MSH4P40965 NUP116YMR047C 3342 nt5.86□□□□□ -1.47
MSH4P40965 OCT1YKL134C 2319 nt5.86□□□□□ -1.47
MSH4P40965 AFT1YGL071W 2073 nt5.86□□□□□ -1.47
MSH4P40965 CAB3YKL088W 1716 nt5.86□□□□□ -1.47
MSH4P40965 SLT2YHR030C 1455 nt5.86□□□□□ -1.47
MSH4P40965 NOP8YOL144W 1455 nt5.86□□□□□ -1.47
MSH4P40965 HMLALPHA2YCL067C 633 nt5.86□□□□□ -1.47
MSH4P40965 MATALPHA2YCR039C 633 nt5.86□□□□□ -1.47
MSH4P40965 YCR108CYCR108C 192 nt5.86□□□□□ -1.47
MSH4P40965 GIM4YEL003W 336 nt5.86□□□□□ -1.47
MSH4P40965 RRF1YHR038W 693 nt5.86□□□□□ -1.47
MSH4P40965 YMR084WYMR084W 789 nt5.86□□□□□ -1.47
MSH4P40965 YBR219CYBR219C 384 nt5.86□□□□□ -1.47
MSH4P40965 SPR3YGR059W 1539 nt5.85□□□□□ -1.47
MSH4P40965 YBR139WYBR139W 1527 nt5.85□□□□□ -1.47
MSH4P40965 FBP26YJL155C 1359 nt5.85□□□□□ -1.47
MSH4P40965 TRM8YDL201W 861 nt5.85□□□□□ -1.47
MSH4P40965 TGL2YDR058C 981 nt5.85□□□□□ -1.47
MSH4P40965 ZRT1YGL255W 1131 nt5.85□□□□□ -1.47
MSH4P40965 YGR035W-AYGR035W-A 222 nt5.85□□□□□ -1.47
MSH4P40965 CAX4YGR036C 720 nt5.85□□□□□ -1.47
MSH4P40965 YGR079WYGR079W 1113 nt5.85□□□□□ -1.47
MSH4P40965 GPI12YMR281W 915 nt5.85□□□□□ -1.47
MSH4P40965 RRG9YNL213C 645 nt5.85□□□□□ -1.47
MSH4P40965 RRP7YCL031C 894 nt5.85□□□□□ -1.47
MSH4P40965 PRM7YDL039C 2097 nt5.85□□□□□ -1.47
MSH4P40965 IME4YGL192W 1803 nt5.85□□□□□ -1.47
MSH4P40965 ERT1YBR239C 1590 nt5.84□□□□□ -1.47
MSH4P40965 SYG1YIL047C 2709 nt5.84□□□□□ -1.47
MSH4P40965 PUT1YLR142W 1431 nt5.84□□□□□ -1.47
MSH4P40965 WTM2YOR229W 1404 nt5.84□□□□□ -1.47
MSH4P40965 RRP8YDR083W 1179 nt5.84□□□□□ -1.47
MSH4P40965 SEH1YGL100W 1050 nt5.84□□□□□ -1.47
MSH4P40965 SOL3YHR163W 750 nt5.84□□□□□ -1.47
MSH4P40965 YBL094CYBL094C 333 nt5.84□□□□□ -1.47
MSH4P40965 FEX1YOR390W 1128 nt5.84□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms