Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RORAP35398 AL162430.1-201ENST00000480705 870 ntBASIC20.96■□□□□ 0.95
RORAP35398 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.96■□□□□ 0.95
RORAP35398 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
RORAP35398 AL358852.1-201ENST00000623174 1268 ntBASIC20.96■□□□□ 0.95
RORAP35398 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RORAP35398 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.96■□□□□ 0.95
RORAP35398 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.96■□□□□ 0.95
RORAP35398 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RORAP35398 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RORAP35398 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RORAP35398 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RORAP35398 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RORAP35398 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RORAP35398 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RORAP35398 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.95■□□□□ 0.94
RORAP35398 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RORAP35398 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RORAP35398 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.95■□□□□ 0.94
RORAP35398 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.95■□□□□ 0.94
RORAP35398 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RORAP35398 AP005435.1-201ENST00000529293 1178 ntBASIC20.95■□□□□ 0.94
RORAP35398 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RORAP35398 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.95■□□□□ 0.94
RORAP35398 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RORAP35398 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RORAP35398 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RORAP35398 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RORAP35398 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RORAP35398 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.94■□□□□ 0.94
RORAP35398 YBX1P1-201ENST00000445822 960 ntBASIC20.94■□□□□ 0.94
RORAP35398 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RORAP35398 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.94■□□□□ 0.94
RORAP35398 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.94■□□□□ 0.94
RORAP35398 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RORAP35398 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.94■□□□□ 0.94
RORAP35398 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.94■□□□□ 0.94
RORAP35398 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RORAP35398 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RORAP35398 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RORAP35398 AC027612.3-201ENST00000413684 1047 ntBASIC20.93■□□□□ 0.94
RORAP35398 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.93■□□□□ 0.94
RORAP35398 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RORAP35398 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RORAP35398 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RORAP35398 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RORAP35398 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RORAP35398 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RORAP35398 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RORAP35398 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RORAP35398 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RORAP35398 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.92■□□□□ 0.94
RORAP35398 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.92■□□□□ 0.94
RORAP35398 AC012414.1-201ENST00000556676 535 ntBASIC20.92■□□□□ 0.94
RORAP35398 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.92■□□□□ 0.94
RORAP35398 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RORAP35398 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RORAP35398 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RORAP35398 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RORAP35398 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RORAP35398 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.92■□□□□ 0.94
RORAP35398 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
RORAP35398 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RORAP35398 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RORAP35398 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RORAP35398 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RORAP35398 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RORAP35398 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RORAP35398 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RORAP35398 AL354811.1-201ENST00000610286 706 ntBASIC20.91■□□□□ 0.94
RORAP35398 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RORAP35398 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RORAP35398 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RORAP35398 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RORAP35398 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RORAP35398 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RORAP35398 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RORAP35398 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
RORAP35398 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.9■□□□□ 0.94
RORAP35398 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.9■□□□□ 0.94
RORAP35398 AL031602.1-201ENST00000633169 911 ntBASIC20.9■□□□□ 0.94
RORAP35398 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RORAP35398 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RORAP35398 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.89■□□□□ 0.94
RORAP35398 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RORAP35398 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RORAP35398 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RORAP35398 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RORAP35398 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.89■□□□□ 0.93
RORAP35398 MIR6084-201ENST00000622012 110 ntBASIC20.89■□□□□ 0.93
RORAP35398 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RORAP35398 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.89■□□□□ 0.93
RORAP35398 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RORAP35398 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RORAP35398 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RORAP35398 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RORAP35398 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.88■□□□□ 0.93
RORAP35398 AL353803.4-201ENST00000565882 1934 ntBASIC20.88■□□□□ 0.93
RORAP35398 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.88■□□□□ 0.93
RORAP35398 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms