Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeast

Predictions only

Length 423 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SHP1	P34223	ADH4	YGL256W	1149 nt		4.43	□□□□□ -1.7
SHP1	P34223	GPP1	YIL053W	753 nt		4.43	□□□□□ -1.7
SHP1	P34223	DPH1	YIL103W	1278 nt		4.43	□□□□□ -1.7
SHP1	P34223	SPO20	YMR017W	1194 nt		4.43	□□□□□ -1.7
SHP1	P34223	TPP1	YMR156C	717 nt		4.43	□□□□□ -1.7
SHP1	P34223	GDE1	YPL110C	3672 nt		4.43	□□□□□ -1.7
SHP1	P34223	SSH1	YBR283C	1473 nt		4.43	□□□□□ -1.7
SHP1	P34223	YBR139W	YBR139W	1527 nt		4.42	□□□□□ -1.7
SHP1	P34223	IPI3	YNL182C	1668 nt		4.42	□□□□□ -1.7
SHP1	P34223	YLR049C	YLR049C	1287 nt		4.42	□□□□□ -1.7
SHP1	P34223	YAR030C	YAR030C	342 nt		4.42	□□□□□ -1.7
SHP1	P34223	YCL021W-A	YCL021W-A	378 nt		4.42	□□□□□ -1.7
SHP1	P34223	RCM1	YNL022C	1473 nt		4.42	□□□□□ -1.7
SHP1	P34223	TFC7	YOR110W	1308 nt		4.42	□□□□□ -1.7
SHP1	P34223	HOT1	YMR172W	2160 nt		4.41	□□□□□ -1.7
SHP1	P34223	HPC2	YBR215W	1878 nt		4.41	□□□□□ -1.7
SHP1	P34223	VHC1	YBR235W	3363 nt		4.41	□□□□□ -1.7
SHP1	P34223	PHO12	YHR215W	1404 nt		4.41	□□□□□ -1.7
SHP1	P34223	PHO11	YAR071W	1404 nt		4.41	□□□□□ -1.7
SHP1	P34223	YGR266W	YGR266W	2106 nt		4.41	□□□□□ -1.7
SHP1	P34223	YIL021C-A	YIL021C-A	270 nt		4.41	□□□□□ -1.7
SHP1	P34223	YLR462W	YLR462W	609 nt		4.41	□□□□□ -1.7
SHP1	P34223	CUS2	YNL286W	858 nt		4.41	□□□□□ -1.7
SHP1	P34223	YBR219C	YBR219C	384 nt		4.41	□□□□□ -1.7
SHP1	P34223	SLM5	YCR024C	1479 nt		4.41	□□□□□ -1.7
SHP1	P34223	IME4	YGL192W	1803 nt		4.41	□□□□□ -1.7
SHP1	P34223	CWH43	YCR017C	2862 nt		4.4	□□□□□ -1.7
SHP1	P34223	RPS14A	YCR031C	414 nt		4.4	□□□□□ -1.71
SHP1	P34223	THI13	YDL244W	1023 nt		4.4	□□□□□ -1.71
SHP1	P34223	SPC19	YDR201W	498 nt		4.4	□□□□□ -1.71
SHP1	P34223	YDR222W	YDR222W	1248 nt		4.4	□□□□□ -1.71
SHP1	P34223	FMP33	YJL161W	543 nt		4.4	□□□□□ -1.71
SHP1	P34223	TTI2	YJR136C	1266 nt		4.4	□□□□□ -1.71
SHP1	P34223	THI11	YJR156C	1023 nt		4.4	□□□□□ -1.71
SHP1	P34223	AIM26	YKL037W	357 nt		4.4	□□□□□ -1.71
SHP1	P34223	TEF4	YKL081W	1239 nt		4.4	□□□□□ -1.71
SHP1	P34223	PET20	YPL159C	762 nt		4.4	□□□□□ -1.71
SHP1	P34223	PBN1	YCL052C	1251 nt		4.4	□□□□□ -1.71
SHP1	P34223	FBP26	YJL155C	1359 nt		4.4	□□□□□ -1.71
SHP1	P34223	YNR065C	YNR065C	3351 nt		4.39	□□□□□ -1.71
SHP1	P34223	ESF1	YDR365C	1887 nt		4.39	□□□□□ -1.71
SHP1	P34223	CTT1	YGR088W	1689 nt		4.39	□□□□□ -1.71
SHP1	P34223	YDR161W	YDR161W	1164 nt		4.39	□□□□□ -1.71
SHP1	P34223	TFB3	YDR460W	966 nt		4.39	□□□□□ -1.71
SHP1	P34223	YGL063C-A	YGL063C-A	150 nt		4.39	□□□□□ -1.71
SHP1	P34223	POP6	YGR030C	477 nt		4.39	□□□□□ -1.71
SHP1	P34223	YGR219W	YGR219W	342 nt		4.39	□□□□□ -1.71
SHP1	P34223	YJR056C	YJR056C	711 nt		4.39	□□□□□ -1.71
SHP1	P34223	YKL162C-A	YKL162C-A	153 nt		4.39	□□□□□ -1.71
SHP1	P34223	TFA2	YKR062W	987 nt		4.39	□□□□□ -1.71
SHP1	P34223	SPS4	YOR313C	1017 nt		4.39	□□□□□ -1.71
SHP1	P34223	SUM1	YDR310C	3189 nt		4.39	□□□□□ -1.71
SHP1	P34223	FAR10	YLR238W	1437 nt		4.38	□□□□□ -1.71
SHP1	P34223	SAP155	YFR040W	3009 nt		4.38	□□□□□ -1.71
SHP1	P34223	TDA1	YMR291W	1761 nt		4.38	□□□□□ -1.71
SHP1	P34223	ELO2	YCR034W	1044 nt		4.38	□□□□□ -1.71
SHP1	P34223	OTU1	YFL044C	906 nt		4.38	□□□□□ -1.71
SHP1	P34223	COG5	YNL051W	1212 nt		4.38	□□□□□ -1.71
SHP1	P34223	ASI2	YNL159C	870 nt		4.38	□□□□□ -1.71
SHP1	P34223	HMS1	YOR032C	1305 nt		4.38	□□□□□ -1.71
SHP1	P34223	ROD1	YOR018W	2514 nt		4.38	□□□□□ -1.71
SHP1	P34223	THI20	YOL055C	1656 nt		4.38	□□□□□ -1.71
SHP1	P34223	TRM13	YOL125W	1431 nt		4.38	□□□□□ -1.71
SHP1	P34223	GAL4	YPL248C	2646 nt		4.37	□□□□□ -1.71
SHP1	P34223	GCV1	YDR019C	1203 nt		4.37	□□□□□ -1.71
SHP1	P34223	SPR28	YDR218C	1272 nt		4.37	□□□□□ -1.71
SHP1	P34223	YDR336W	YDR336W	945 nt		4.37	□□□□□ -1.71
SHP1	P34223	CNL1	YDR357C	369 nt		4.37	□□□□□ -1.71
SHP1	P34223	IES6	YEL044W	501 nt		4.37	□□□□□ -1.71
SHP1	P34223	RPS0A	YGR214W	759 nt		4.37	□□□□□ -1.71
SHP1	P34223	SGN1	YIR001C	753 nt		4.37	□□□□□ -1.71
SHP1	P34223	YJR112W-A	YJR112W-A	330 nt		4.37	□□□□□ -1.71
SHP1	P34223	YLR154W-B	YLR154W-B	165 nt		4.37	□□□□□ -1.71
SHP1	P34223	ELO3	YLR372W	1038 nt		4.37	□□□□□ -1.71
SHP1	P34223	YMR084W	YMR084W	789 nt		4.37	□□□□□ -1.71
SHP1	P34223	ASC1	YMR116C	960 nt		4.37	□□□□□ -1.71
SHP1	P34223	CMR3	YPR013C	954 nt		4.37	□□□□□ -1.71
SHP1	P34223	KCC4	YCL024W	3114 nt		4.37	□□□□□ -1.71
SHP1	P34223	PEX29	YDR479C	1665 nt		4.37	□□□□□ -1.71
SHP1	P34223	KRS1	YDR037W	1776 nt		4.37	□□□□□ -1.71
SHP1	P34223	TRF5	YNL299W	1929 nt		4.36	□□□□□ -1.71
SHP1	P34223	BLM10	YFL007W	6432 nt		4.36	□□□□□ -1.71
SHP1	P34223	PEX30	YLR324W	1572 nt		4.36	□□□□□ -1.71
SHP1	P34223	TRM44	YPL030W	1704 nt		4.36	□□□□□ -1.71
SHP1	P34223	SDT1	YGL224C	843 nt		4.36	□□□□□ -1.71
SHP1	P34223	HIS5	YIL116W	1158 nt		4.36	□□□□□ -1.71
SHP1	P34223	YLL047W	YLL047W	384 nt		4.36	□□□□□ -1.71
SHP1	P34223	UPS2	YLR168C	693 nt		4.36	□□□□□ -1.71
SHP1	P34223	HMX1	YLR205C	954 nt		4.36	□□□□□ -1.71
SHP1	P34223	PSY3	YLR376C	729 nt		4.36	□□□□□ -1.71
SHP1	P34223	RAD10	YML095C	633 nt		4.36	□□□□□ -1.71
SHP1	P34223	RPS19A	YOL121C	435 nt		4.36	□□□□□ -1.71
SHP1	P34223	UBS1	YBR165W	834 nt		4.36	□□□□□ -1.71
SHP1	P34223	HO	YDL227C	1761 nt		4.35	□□□□□ -1.71
SHP1	P34223	STR2	YJR130C	1920 nt		4.35	□□□□□ -1.71
SHP1	P34223	MDL1	YLR188W	2088 nt		4.35	□□□□□ -1.71
SHP1	P34223	FRE1	YLR214W	2061 nt		4.35	□□□□□ -1.71
SHP1	P34223	YER133W-A	YER133W-A	342 nt		4.35	□□□□□ -1.71
SHP1	P34223	YHR022C	YHR022C	771 nt		4.35	□□□□□ -1.71
SHP1	P34223	YIL163C	YIL163C	354 nt		4.35	□□□□□ -1.71

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