Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 MNN11YJL183W 1269 nt3.37□□□□□ -1.87
RPB9P27999 CPR6YLR216C 1116 nt3.37□□□□□ -1.87
RPB9P27999 YLR407WYLR407W 687 nt3.37□□□□□ -1.87
RPB9P27999 COG5YNL051W 1212 nt3.37□□□□□ -1.87
RPB9P27999 CUZ1YNL155W 825 nt3.37□□□□□ -1.87
RPB9P27999 PFA4YOL003C 1137 nt3.37□□□□□ -1.87
RPB9P27999 MTR10YOR160W 2919 nt3.37□□□□□ -1.87
RPB9P27999 FDC1YDR539W 1512 nt3.37□□□□□ -1.87
RPB9P27999 MMT1YMR177W 1533 nt3.37□□□□□ -1.87
RPB9P27999 AIM21YIR003W 2040 nt3.37□□□□□ -1.87
RPB9P27999 IMD2YHR216W 1572 nt3.37□□□□□ -1.87
RPB9P27999 OAF1YAL051W 3144 nt3.37□□□□□ -1.87
RPB9P27999 PRD1YCL057W 2139 nt3.37□□□□□ -1.87
RPB9P27999 ZPR1YGR211W 1461 nt3.36□□□□□ -1.87
RPB9P27999 snR7-SsnR7-S 179 nt3.36□□□□□ -1.87
RPB9P27999 DCV1YFR012W 609 nt3.36□□□□□ -1.87
RPB9P27999 CNN1YFR046C 1086 nt3.36□□□□□ -1.87
RPB9P27999 VMA22YHR060W 546 nt3.36□□□□□ -1.87
RPB9P27999 YIL171WYIL171W 330 nt3.36□□□□□ -1.87
RPB9P27999 SFH5YJL145W 885 nt3.36□□□□□ -1.87
RPB9P27999 RPS1BYML063W 768 nt3.36□□□□□ -1.87
RPB9P27999 YCL022CYCL022C 516 nt3.36□□□□□ -1.87
RPB9P27999 EUG1YDR518W 1554 nt3.36□□□□□ -1.87
RPB9P27999 RKM3YBR030W 1659 nt3.36□□□□□ -1.87
RPB9P27999 STV1YMR054W 2673 nt3.36□□□□□ -1.87
RPB9P27999 RSC58YLR033W 1509 nt3.35□□□□□ -1.87
RPB9P27999 RMR1YGL250W 726 nt3.35□□□□□ -1.87
RPB9P27999 CDA2YLR308W 939 nt3.35□□□□□ -1.87
RPB9P27999 YPL162CYPL162C 822 nt3.35□□□□□ -1.87
RPB9P27999 CNS1YBR155W 1158 nt3.35□□□□□ -1.87
RPB9P27999 GLN4YOR168W 2430 nt3.35□□□□□ -1.87
RPB9P27999 AXL2YIL140W 2472 nt3.35□□□□□ -1.87
RPB9P27999 MDM38YOL027C 1722 nt3.35□□□□□ -1.87
RPB9P27999 SSL1YLR005W 1386 nt3.35□□□□□ -1.87
RPB9P27999 TYR1YBR166C 1359 nt3.35□□□□□ -1.87
RPB9P27999 RRN11YML043C 1524 nt3.34□□□□□ -1.87
RPB9P27999 TCB3YML072C 4638 nt3.34□□□□□ -1.87
RPB9P27999 NSE3YDR288W 912 nt3.34□□□□□ -1.87
RPB9P27999 IRC6YFR043C 714 nt3.34□□□□□ -1.87
RPB9P27999 YGL063C-AYGL063C-A 150 nt3.34□□□□□ -1.87
RPB9P27999 COX4YGL187C 468 nt3.34□□□□□ -1.87
RPB9P27999 YHL045WYHL045W 348 nt3.34□□□□□ -1.87
RPB9P27999 YHR032C-AYHR032C-A 120 nt3.34□□□□□ -1.87
RPB9P27999 TTI2YJR136C 1266 nt3.34□□□□□ -1.87
RPB9P27999 JLP1YLL057C 1239 nt3.34□□□□□ -1.87
RPB9P27999 YLR049CYLR049C 1287 nt3.34□□□□□ -1.87
RPB9P27999 YLR154W-BYLR154W-B 165 nt3.34□□□□□ -1.87
RPB9P27999 SET6YPL165C 1122 nt3.34□□□□□ -1.87
RPB9P27999 KAP114YGL241W 3015 nt3.34□□□□□ -1.88
RPB9P27999 FMP30YPL103C 1407 nt3.34□□□□□ -1.88
RPB9P27999 YJL206CYJL206C 2277 nt3.33□□□□□ -1.88
RPB9P27999 ALG11YNL048W 1647 nt3.33□□□□□ -1.88
RPB9P27999 FKH2YNL068C 2589 nt3.33□□□□□ -1.88
RPB9P27999 OCA4YCR095C 1089 nt3.33□□□□□ -1.88
RPB9P27999 GRX6YDL010W 696 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)CtK(CUU)C 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)D1tK(CUU)D1 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)D2tK(CUU)D2 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)E1tK(CUU)E1 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)E2tK(CUU)E2 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)FtK(CUU)F 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)G1tK(CUU)G1 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)G2tK(CUU)G2 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)G3tK(CUU)G3 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)ItK(CUU)I 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)JtK(CUU)J 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)KtK(CUU)K 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)MtK(CUU)M 73 nt3.33□□□□□ -1.88
RPB9P27999 tK(CUU)PtK(CUU)P 73 nt3.33□□□□□ -1.88
RPB9P27999 YGR204C-AYGR204C-A 114 nt3.33□□□□□ -1.88
RPB9P27999 YHL034W-AYHL034W-A 462 nt3.33□□□□□ -1.88
RPB9P27999 YIR018C-AYIR018C-A 138 nt3.33□□□□□ -1.88
RPB9P27999 LOH1YJL038C 660 nt3.33□□□□□ -1.88
RPB9P27999 ATP12YJL180C 978 nt3.33□□□□□ -1.88
RPB9P27999 CDC42YLR229C 576 nt3.33□□□□□ -1.88
RPB9P27999 CPR3YML078W 549 nt3.33□□□□□ -1.88
RPB9P27999 MCM1YMR043W 861 nt3.33□□□□□ -1.88
RPB9P27999 YOL019W-AYOL019W-A 153 nt3.33□□□□□ -1.88
RPB9P27999 NDJ1YOL104C 1059 nt3.33□□□□□ -1.88
RPB9P27999 VPS69YPR087W 321 nt3.33□□□□□ -1.88
RPB9P27999 BRE4YDL231C 3378 nt3.33□□□□□ -1.88
RPB9P27999 SPO1YNL012W 1896 nt3.33□□□□□ -1.88
RPB9P27999 MPS3YJL019W 2049 nt3.32□□□□□ -1.88
RPB9P27999 SRS2YJL092W 3525 nt3.32□□□□□ -1.88
RPB9P27999 AHA1YDR214W 1053 nt3.32□□□□□ -1.88
RPB9P27999 RMD5YDR255C 1266 nt3.32□□□□□ -1.88
RPB9P27999 SEM1YDR363W-A 270 nt3.32□□□□□ -1.88
RPB9P27999 NAT2YGR147C 867 nt3.32□□□□□ -1.88
RPB9P27999 TIF34YMR146C 1044 nt3.32□□□□□ -1.88
RPB9P27999 RNA1YMR235C 1224 nt3.32□□□□□ -1.88
RPB9P27999 ATG8YBL078C 354 nt3.32□□□□□ -1.88
RPB9P27999 MFM1YPL060W 1242 nt3.32□□□□□ -1.88
RPB9P27999 MET16YPR167C 786 nt3.32□□□□□ -1.88
RPB9P27999 SRO9YCL037C 1305 nt3.32□□□□□ -1.88
RPB9P27999 IOC4YMR044W 1428 nt3.32□□□□□ -1.88
RPB9P27999 KRE6YPR159W 2163 nt3.32□□□□□ -1.88
RPB9P27999 CRT10YOL063C 2874 nt3.32□□□□□ -1.88
RPB9P27999 PUF2YPR042C 3228 nt3.32□□□□□ -1.88
RPB9P27999 SKG6YHR149C 2205 nt3.31□□□□□ -1.88
RPB9P27999 ARX1YDR101C 1782 nt3.31□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms