Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.06■□□□□ 0.64
CD40P25942 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.06■□□□□ 0.64
CD40P25942 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD40P25942 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.06■□□□□ 0.64
CD40P25942 AC092068.2-201ENST00000590491 1708 ntBASIC19.06■□□□□ 0.64
CD40P25942 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD40P25942 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CD40P25942 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.06■□□□□ 0.64
CD40P25942 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.06■□□□□ 0.64
CD40P25942 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.06■□□□□ 0.64
CD40P25942 AL358852.1-201ENST00000623174 1268 ntBASIC19.06■□□□□ 0.64
CD40P25942 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD40P25942 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.06■□□□□ 0.64
CD40P25942 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CD40P25942 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.05■□□□□ 0.64
CD40P25942 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CD40P25942 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
CD40P25942 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.05■□□□□ 0.64
CD40P25942 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.05■□□□□ 0.64
CD40P25942 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CD40P25942 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.05■□□□□ 0.64
CD40P25942 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.05■□□□□ 0.64
CD40P25942 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD40P25942 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD40P25942 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CD40P25942 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD40P25942 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CD40P25942 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD40P25942 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD40P25942 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.04■□□□□ 0.64
CD40P25942 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD40P25942 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.04■□□□□ 0.64
CD40P25942 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.04■□□□□ 0.64
CD40P25942 AC087623.3-201ENST00000607047 1098 ntBASIC19.04■□□□□ 0.64
CD40P25942 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.04■□□□□ 0.64
CD40P25942 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD40P25942 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD40P25942 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD40P25942 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.03■□□□□ 0.64
CD40P25942 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD40P25942 AC012414.1-201ENST00000556676 535 ntBASIC19.03■□□□□ 0.64
CD40P25942 AL354811.1-201ENST00000610286 706 ntBASIC19.03■□□□□ 0.64
CD40P25942 AC068587.7-201ENST00000641602 218 ntBASIC19.03■□□□□ 0.64
CD40P25942 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD40P25942 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD40P25942 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.03■□□□□ 0.64
CD40P25942 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.03■□□□□ 0.64
CD40P25942 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD40P25942 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD40P25942 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
CD40P25942 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD40P25942 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.02■□□□□ 0.64
CD40P25942 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD40P25942 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD40P25942 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD40P25942 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD40P25942 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD40P25942 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CD40P25942 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CD40P25942 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CD40P25942 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD40P25942 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD40P25942 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD40P25942 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.01■□□□□ 0.63
CD40P25942 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.01■□□□□ 0.63
CD40P25942 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.01■□□□□ 0.63
CD40P25942 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CD40P25942 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CD40P25942 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.01■□□□□ 0.63
CD40P25942 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.01■□□□□ 0.63
CD40P25942 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.01■□□□□ 0.63
CD40P25942 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.01■□□□□ 0.63
CD40P25942 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19■□□□□ 0.63
CD40P25942 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CD40P25942 AC093323.1-202ENST00000635031 2045 ntBASIC19■□□□□ 0.63
CD40P25942 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19■□□□□ 0.63
CD40P25942 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CD40P25942 AC027612.3-201ENST00000413684 1047 ntBASIC19■□□□□ 0.63
CD40P25942 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD40P25942 YBX1P1-201ENST00000445822 960 ntBASIC19■□□□□ 0.63
CD40P25942 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19■□□□□ 0.63
CD40P25942 ANKRD20A6P-201ENST00000618763 204 ntBASIC19■□□□□ 0.63
CD40P25942 MIR6084-201ENST00000622012 110 ntBASIC19■□□□□ 0.63
CD40P25942 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19■□□□□ 0.63
CD40P25942 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD40P25942 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD40P25942 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms