Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBCP0CG48 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.31■□□□□ 0.68
UBCP0CG48 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBCP0CG48 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
UBCP0CG48 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBCP0CG48 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBCP0CG48 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.3■□□□□ 0.68
UBCP0CG48 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBCP0CG48 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBCP0CG48 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBCP0CG48 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.3■□□□□ 0.68
UBCP0CG48 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBCP0CG48 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.3■□□□□ 0.68
UBCP0CG48 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.3■□□□□ 0.68
UBCP0CG48 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.3■□□□□ 0.68
UBCP0CG48 FP325331.1-202ENST00000623531 1380 ntBASIC19.3■□□□□ 0.68
UBCP0CG48 AC139530.1-201ENST00000575312 1977 ntBASIC19.3■□□□□ 0.68
UBCP0CG48 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBCP0CG48 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBCP0CG48 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBCP0CG48 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBCP0CG48 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBCP0CG48 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBCP0CG48 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBCP0CG48 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.29■□□□□ 0.68
UBCP0CG48 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
UBCP0CG48 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
UBCP0CG48 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
UBCP0CG48 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
UBCP0CG48 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.29■□□□□ 0.68
UBCP0CG48 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
UBCP0CG48 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBCP0CG48 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
UBCP0CG48 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.28■□□□□ 0.68
UBCP0CG48 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
UBCP0CG48 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBCP0CG48 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBCP0CG48 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.28■□□□□ 0.68
UBCP0CG48 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.28■□□□□ 0.68
UBCP0CG48 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.28■□□□□ 0.68
UBCP0CG48 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.28■□□□□ 0.68
UBCP0CG48 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBCP0CG48 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.28■□□□□ 0.68
UBCP0CG48 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBCP0CG48 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBCP0CG48 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBCP0CG48 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBCP0CG48 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBCP0CG48 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.27■□□□□ 0.68
UBCP0CG48 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.27■□□□□ 0.68
UBCP0CG48 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
UBCP0CG48 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBCP0CG48 AC087742.1-201ENST00000575880 1738 ntBASIC19.27■□□□□ 0.68
UBCP0CG48 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBCP0CG48 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBCP0CG48 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBCP0CG48 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
UBCP0CG48 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBCP0CG48 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBCP0CG48 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBCP0CG48 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
UBCP0CG48 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
UBCP0CG48 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
UBCP0CG48 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 BX664725.1-201ENST00000438252 379 ntBASIC19.26■□□□□ 0.67
UBCP0CG48 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.26■□□□□ 0.67
UBCP0CG48 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.26■□□□□ 0.67
UBCP0CG48 AC021242.3-201ENST00000607598 1377 ntBASIC19.26■□□□□ 0.67
UBCP0CG48 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
UBCP0CG48 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
UBCP0CG48 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBCP0CG48 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBCP0CG48 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBCP0CG48 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
UBCP0CG48 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBCP0CG48 C11orf96-202ENST00000528572 1834 ntBASIC19.25■□□□□ 0.67
UBCP0CG48 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBCP0CG48 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBCP0CG48 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBCP0CG48 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBCP0CG48 AC009086.3-201ENST00000623486 1008 ntBASIC19.25■□□□□ 0.67
UBCP0CG48 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBCP0CG48 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBCP0CG48 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UBCP0CG48 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBCP0CG48 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms