Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.89■■□□□ 1.1
PCCBP05166 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCCBP05166 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.89■■□□□ 1.09
PCCBP05166 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCCBP05166 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCCBP05166 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCCBP05166 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCCBP05166 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.89■■□□□ 1.09
PCCBP05166 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCCBP05166 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.89■■□□□ 1.09
PCCBP05166 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PCCBP05166 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCCBP05166 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCCBP05166 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCCBP05166 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCCBP05166 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.88■■□□□ 1.09
PCCBP05166 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCCBP05166 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
PCCBP05166 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCCBP05166 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PCCBP05166 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.88■■□□□ 1.09
PCCBP05166 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCCBP05166 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.88■■□□□ 1.09
PCCBP05166 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCCBP05166 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.88■■□□□ 1.09
PCCBP05166 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.88■■□□□ 1.09
PCCBP05166 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.87■■□□□ 1.09
PCCBP05166 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.87■■□□□ 1.09
PCCBP05166 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.87■■□□□ 1.09
PCCBP05166 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.87■■□□□ 1.09
PCCBP05166 AP005435.1-201ENST00000529293 1178 ntBASIC21.87■■□□□ 1.09
PCCBP05166 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCCBP05166 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCCBP05166 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCCBP05166 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
PCCBP05166 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
PCCBP05166 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.87■■□□□ 1.09
PCCBP05166 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCCBP05166 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCCBP05166 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCCBP05166 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.86■■□□□ 1.09
PCCBP05166 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.86■■□□□ 1.09
PCCBP05166 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.86■■□□□ 1.09
PCCBP05166 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.86■■□□□ 1.09
PCCBP05166 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCCBP05166 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCCBP05166 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCCBP05166 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.86■■□□□ 1.09
PCCBP05166 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PCCBP05166 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.85■■□□□ 1.09
PCCBP05166 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
PCCBP05166 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.85■■□□□ 1.09
PCCBP05166 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCCBP05166 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCCBP05166 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCCBP05166 MIR572-201ENST00000384983 95 ntBASIC21.84■■□□□ 1.09
PCCBP05166 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.84■■□□□ 1.09
PCCBP05166 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
PCCBP05166 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.84■■□□□ 1.09
PCCBP05166 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.84■■□□□ 1.09
PCCBP05166 MIR6084-201ENST00000622012 110 ntBASIC21.84■■□□□ 1.09
PCCBP05166 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCCBP05166 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.83■■□□□ 1.09
PCCBP05166 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCCBP05166 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCCBP05166 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PCCBP05166 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCCBP05166 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCCBP05166 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.83■■□□□ 1.09
PCCBP05166 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.83■■□□□ 1.09
PCCBP05166 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCCBP05166 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.83■■□□□ 1.09
PCCBP05166 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.83■■□□□ 1.09
PCCBP05166 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCCBP05166 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCCBP05166 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCCBP05166 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PCCBP05166 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.82■■□□□ 1.08
PCCBP05166 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.82■■□□□ 1.08
PCCBP05166 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 AC097381.1-201ENST00000429019 1296 ntBASIC21.82■■□□□ 1.08
PCCBP05166 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 AC087623.3-201ENST00000607047 1098 ntBASIC21.82■■□□□ 1.08
PCCBP05166 MIR5787-201ENST00000611784 55 ntBASIC21.82■■□□□ 1.08
PCCBP05166 MIR6821-201ENST00000617625 74 ntBASIC21.82■■□□□ 1.08
PCCBP05166 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms