Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RAB3DO95716 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RAB3DO95716 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3DO95716 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3DO95716 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 AC018755.3-202ENST00000596210 929 ntBASIC18.73■□□□□ 0.59
RAB3DO95716 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 AC087742.1-201ENST00000575880 1738 ntBASIC18.73■□□□□ 0.59
RAB3DO95716 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB3DO95716 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RAB3DO95716 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RAB3DO95716 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3DO95716 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3DO95716 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3DO95716 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB3DO95716 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3DO95716 FAM99A-202ENST00000538190 1989 ntBASIC18.72■□□□□ 0.59
RAB3DO95716 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAB3DO95716 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB3DO95716 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAB3DO95716 AC133552.2-201ENST00000619106 1032 ntBASIC18.72■□□□□ 0.59
RAB3DO95716 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3DO95716 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAB3DO95716 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RAB3DO95716 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3DO95716 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3DO95716 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3DO95716 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3DO95716 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3DO95716 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3DO95716 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3DO95716 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB3DO95716 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB3DO95716 AC087393.1-201ENST00000582896 145 ntBASIC18.71■□□□□ 0.59
RAB3DO95716 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3DO95716 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3DO95716 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3DO95716 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3DO95716 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3DO95716 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3DO95716 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3DO95716 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB3DO95716 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB3DO95716 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3DO95716 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB3DO95716 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3DO95716 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3DO95716 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3DO95716 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3DO95716 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3DO95716 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3DO95716 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3DO95716 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB3DO95716 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB3DO95716 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAB3DO95716 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3DO95716 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3DO95716 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
RAB3DO95716 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3DO95716 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RAB3DO95716 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3DO95716 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
RAB3DO95716 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3DO95716 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3DO95716 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RAB3DO95716 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3DO95716 AC010542.4-201ENST00000563151 1910 ntBASIC18.68■□□□□ 0.58
RAB3DO95716 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3DO95716 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3DO95716 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3DO95716 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3DO95716 AC011551.1-201ENST00000614101 683 ntBASIC18.67■□□□□ 0.58
RAB3DO95716 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3DO95716 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3DO95716 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RAB3DO95716 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3DO95716 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAB3DO95716 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAB3DO95716 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3DO95716 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB3DO95716 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB3DO95716 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3DO95716 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3DO95716 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3DO95716 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB3DO95716 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3DO95716 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3DO95716 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3DO95716 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3DO95716 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3DO95716 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3DO95716 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB3DO95716 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms