Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX4O95219 C1orf229-201ENST00000623686 2258 ntBASIC20.59■□□□□ 0.89
SNX4O95219 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SNX4O95219 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 AL139246.5-201ENST00000606645 996 ntBASIC20.59■□□□□ 0.89
SNX4O95219 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SNX4O95219 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.59■□□□□ 0.89
SNX4O95219 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX4O95219 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX4O95219 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.58■□□□□ 0.89
SNX4O95219 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX4O95219 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX4O95219 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX4O95219 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNX4O95219 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.58■□□□□ 0.89
SNX4O95219 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX4O95219 AC096631.2-201ENST00000436136 790 ntBASIC20.58■□□□□ 0.89
SNX4O95219 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX4O95219 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SNX4O95219 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.58■□□□□ 0.88
SNX4O95219 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.58■□□□□ 0.88
SNX4O95219 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX4O95219 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX4O95219 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX4O95219 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SNX4O95219 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX4O95219 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.57■□□□□ 0.88
SNX4O95219 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX4O95219 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX4O95219 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX4O95219 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX4O95219 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SNX4O95219 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX4O95219 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX4O95219 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX4O95219 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SNX4O95219 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX4O95219 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX4O95219 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX4O95219 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX4O95219 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX4O95219 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 AC099791.2-201ENST00000605725 427 ntBASIC20.55■□□□□ 0.88
SNX4O95219 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.55■□□□□ 0.88
SNX4O95219 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX4O95219 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX4O95219 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX4O95219 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SNX4O95219 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX4O95219 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX4O95219 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SNX4O95219 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SNX4O95219 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 UNC93B3-201ENST00000308076 687 ntBASIC20.54■□□□□ 0.88
SNX4O95219 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
SNX4O95219 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX4O95219 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 SYT6-210ENST00000641643 1587 ntBASIC20.54■□□□□ 0.88
SNX4O95219 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX4O95219 LINC00526-201ENST00000581067 1875 ntBASIC20.54■□□□□ 0.88
SNX4O95219 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX4O95219 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX4O95219 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX4O95219 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SNX4O95219 AC110285.6-201ENST00000617652 491 ntBASIC20.53■□□□□ 0.88
SNX4O95219 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX4O95219 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX4O95219 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SNX4O95219 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX4O95219 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX4O95219 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX4O95219 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX4O95219 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX4O95219 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SNX4O95219 FP325331.1-202ENST00000623531 1380 ntBASIC20.52■□□□□ 0.88
SNX4O95219 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms