Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
XRCC2O43543 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
XRCC2O43543 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.12■□□□□ 0.65
XRCC2O43543 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
XRCC2O43543 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
XRCC2O43543 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.12■□□□□ 0.65
XRCC2O43543 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
XRCC2O43543 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
XRCC2O43543 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
XRCC2O43543 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
XRCC2O43543 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
XRCC2O43543 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
XRCC2O43543 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
XRCC2O43543 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
XRCC2O43543 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
XRCC2O43543 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.11■□□□□ 0.65
XRCC2O43543 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
XRCC2O43543 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
XRCC2O43543 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC2O43543 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.1■□□□□ 0.65
XRCC2O43543 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.1■□□□□ 0.65
XRCC2O43543 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
XRCC2O43543 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC2O43543 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC2O43543 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC2O43543 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
XRCC2O43543 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.1■□□□□ 0.65
XRCC2O43543 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC2O43543 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
XRCC2O43543 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC2O43543 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.1■□□□□ 0.65
XRCC2O43543 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 AC127496.7-201ENST00000625110 1798 ntBASIC19.09■□□□□ 0.65
XRCC2O43543 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.09■□□□□ 0.65
XRCC2O43543 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.09■□□□□ 0.65
XRCC2O43543 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
XRCC2O43543 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
XRCC2O43543 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC2O43543 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
XRCC2O43543 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.09■□□□□ 0.65
XRCC2O43543 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
XRCC2O43543 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.08■□□□□ 0.65
XRCC2O43543 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
XRCC2O43543 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
XRCC2O43543 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
XRCC2O43543 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
XRCC2O43543 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
XRCC2O43543 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
XRCC2O43543 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XRCC2O43543 AL356441.2-201ENST00000443009 864 ntBASIC19.08■□□□□ 0.64
XRCC2O43543 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.08■□□□□ 0.64
XRCC2O43543 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.08■□□□□ 0.64
XRCC2O43543 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.08■□□□□ 0.64
XRCC2O43543 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
XRCC2O43543 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XRCC2O43543 GUSBP5-202ENST00000510805 1989 ntBASIC19.08■□□□□ 0.64
XRCC2O43543 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.07■□□□□ 0.64
XRCC2O43543 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC2O43543 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC2O43543 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.07■□□□□ 0.64
XRCC2O43543 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC2O43543 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC2O43543 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
XRCC2O43543 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.07■□□□□ 0.64
XRCC2O43543 AL499627.2-201ENST00000606283 725 ntBASIC19.07■□□□□ 0.64
XRCC2O43543 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC2O43543 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC2O43543 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
XRCC2O43543 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC2O43543 AC004687.1-201ENST00000579003 1625 ntBASIC19.07■□□□□ 0.64
XRCC2O43543 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC2O43543 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
XRCC2O43543 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC2O43543 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.06■□□□□ 0.64
XRCC2O43543 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC2O43543 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.06■□□□□ 0.64
XRCC2O43543 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC2O43543 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC2O43543 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
XRCC2O43543 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC2O43543 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
XRCC2O43543 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms