Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.43■■□□□ 1.82
FOXN1O15353 pRNA.6-201ENST00000610482 90 ntBASIC26.43■■□□□ 1.82
FOXN1O15353 pRNA.5-201ENST00000612139 90 ntBASIC26.43■■□□□ 1.82
FOXN1O15353 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
FOXN1O15353 pRNA.11-201ENST00000618423 90 ntBASIC26.43■■□□□ 1.82
FOXN1O15353 pRNA.13-201ENST00000619112 90 ntBASIC26.43■■□□□ 1.82
FOXN1O15353 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FOXN1O15353 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FOXN1O15353 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
FOXN1O15353 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
FOXN1O15353 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXN1O15353 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXN1O15353 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
FOXN1O15353 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXN1O15353 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.42■■□□□ 1.82
FOXN1O15353 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXN1O15353 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXN1O15353 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.42■■□□□ 1.82
FOXN1O15353 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
FOXN1O15353 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FOXN1O15353 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
FOXN1O15353 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
FOXN1O15353 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.41■■□□□ 1.82
FOXN1O15353 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
FOXN1O15353 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
FOXN1O15353 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
FOXN1O15353 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FOXN1O15353 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
FOXN1O15353 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.41■■□□□ 1.82
FOXN1O15353 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FOXN1O15353 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
FOXN1O15353 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.4■■□□□ 1.82
FOXN1O15353 AP004607.4-201ENST00000530158 1459 ntBASIC26.4■■□□□ 1.82
FOXN1O15353 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.39■■□□□ 1.82
FOXN1O15353 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.39■■□□□ 1.82
FOXN1O15353 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.39■■□□□ 1.82
FOXN1O15353 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.39■■□□□ 1.82
FOXN1O15353 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
FOXN1O15353 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.39■■□□□ 1.82
FOXN1O15353 MIR6089-201ENST00000616698 64 ntBASIC26.39■■□□□ 1.82
FOXN1O15353 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
FOXN1O15353 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
FOXN1O15353 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
FOXN1O15353 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
FOXN1O15353 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
FOXN1O15353 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXN1O15353 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXN1O15353 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXN1O15353 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
FOXN1O15353 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.38■■□□□ 1.81
FOXN1O15353 AC069152.1-201ENST00000438030 544 ntBASIC26.38■■□□□ 1.81
FOXN1O15353 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXN1O15353 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FOXN1O15353 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
FOXN1O15353 LINC00543-201ENST00000567234 1845 ntBASIC26.37■■□□□ 1.81
FOXN1O15353 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
FOXN1O15353 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
FOXN1O15353 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.37■■□□□ 1.81
FOXN1O15353 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
FOXN1O15353 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
FOXN1O15353 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
FOXN1O15353 TSPY6P-201ENST00000448518 926 ntBASIC26.37■■□□□ 1.81
FOXN1O15353 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.37■■□□□ 1.81
FOXN1O15353 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.37■■□□□ 1.81
FOXN1O15353 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
FOXN1O15353 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
FOXN1O15353 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.36■■□□□ 1.81
FOXN1O15353 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FOXN1O15353 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.36■■□□□ 1.81
FOXN1O15353 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
FOXN1O15353 TPRG1LP1-201ENST00000598702 760 ntBASIC26.36■■□□□ 1.81
FOXN1O15353 AL121832.2-201ENST00000610979 668 ntBASIC26.36■■□□□ 1.81
FOXN1O15353 AC011767.1-201ENST00000617410 1153 ntBASIC26.36■■□□□ 1.81
FOXN1O15353 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FOXN1O15353 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
FOXN1O15353 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.36■■□□□ 1.81
FOXN1O15353 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
FOXN1O15353 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
FOXN1O15353 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FOXN1O15353 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
FOXN1O15353 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
FOXN1O15353 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
FOXN1O15353 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
FOXN1O15353 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
FOXN1O15353 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
FOXN1O15353 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.35■■□□□ 1.81
FOXN1O15353 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
FOXN1O15353 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
FOXN1O15353 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
FOXN1O15353 AL138781.1-201ENST00000566567 1274 ntBASIC26.35■■□□□ 1.81
FOXN1O15353 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.35■■□□□ 1.81
FOXN1O15353 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.35■■□□□ 1.81
FOXN1O15353 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
FOXN1O15353 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.34■■□□□ 1.81
FOXN1O15353 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
FOXN1O15353 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
FOXN1O15353 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
FOXN1O15353 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.34■■□□□ 1.81
FOXN1O15353 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
FOXN1O15353 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms