Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 pRNA.13-201ENST00000619112 90 ntBASIC16.94■□□□□ 0.3
NDUFA4O00483 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.94■□□□□ 0.3
NDUFA4O00483 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.94■□□□□ 0.3
NDUFA4O00483 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDUFA4O00483 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDUFA4O00483 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDUFA4O00483 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.94■□□□□ 0.3
NDUFA4O00483 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
NDUFA4O00483 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.94■□□□□ 0.3
NDUFA4O00483 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.94■□□□□ 0.3
NDUFA4O00483 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA4O00483 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA4O00483 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NDUFA4O00483 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA4O00483 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NDUFA4O00483 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA4O00483 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA4O00483 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.93■□□□□ 0.3
NDUFA4O00483 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA4O00483 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NDUFA4O00483 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.93■□□□□ 0.3
NDUFA4O00483 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA4O00483 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA4O00483 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA4O00483 AC133637.1-201ENST00000624115 1537 ntBASIC16.92■□□□□ 0.3
NDUFA4O00483 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA4O00483 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA4O00483 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA4O00483 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.92■□□□□ 0.3
NDUFA4O00483 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.92■□□□□ 0.3
NDUFA4O00483 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NDUFA4O00483 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA4O00483 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA4O00483 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NDUFA4O00483 AC233723.2-201ENST00000623798 2106 ntBASIC16.91■□□□□ 0.3
NDUFA4O00483 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NDUFA4O00483 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.91■□□□□ 0.3
NDUFA4O00483 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 SYT6-210ENST00000641643 1587 ntBASIC16.91■□□□□ 0.3
NDUFA4O00483 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.91■□□□□ 0.3
NDUFA4O00483 AL138724.1-201ENST00000606771 1088 ntBASIC16.91■□□□□ 0.3
NDUFA4O00483 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NDUFA4O00483 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NDUFA4O00483 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NDUFA4O00483 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA4O00483 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.91■□□□□ 0.3
NDUFA4O00483 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFA4O00483 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.9■□□□□ 0.3
NDUFA4O00483 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 MIR3181-201ENST00000578512 73 ntBASIC16.9■□□□□ 0.3
NDUFA4O00483 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.9■□□□□ 0.3
NDUFA4O00483 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.9■□□□□ 0.3
NDUFA4O00483 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NDUFA4O00483 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.9■□□□□ 0.3
NDUFA4O00483 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA4O00483 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.9■□□□□ 0.3
NDUFA4O00483 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NDUFA4O00483 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NDUFA4O00483 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
NDUFA4O00483 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFA4O00483 LINC01960-201ENST00000563759 1884 ntBASIC16.89■□□□□ 0.29
NDUFA4O00483 AL136116.3-201ENST00000402907 1138 ntBASIC16.89■□□□□ 0.29
NDUFA4O00483 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.89■□□□□ 0.29
NDUFA4O00483 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
NDUFA4O00483 AC127496.7-201ENST00000625110 1798 ntBASIC16.89■□□□□ 0.29
NDUFA4O00483 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFA4O00483 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NDUFA4O00483 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NDUFA4O00483 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFA4O00483 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.89■□□□□ 0.29
NDUFA4O00483 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NDUFA4O00483 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFA4O00483 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFA4O00483 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.88■□□□□ 0.29
NDUFA4O00483 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFA4O00483 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFA4O00483 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
NDUFA4O00483 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFA4O00483 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NDUFA4O00483 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms