Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM4A7MD48 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM4A7MD48 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM4A7MD48 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM4A7MD48 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM4A7MD48 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM4A7MD48 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM4A7MD48 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM4A7MD48 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM4A7MD48 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.76■□□□□ 0.43
SRRM4A7MD48 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM4A7MD48 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM4A7MD48 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.76■□□□□ 0.43
SRRM4A7MD48 AC080038.3-201ENST00000623346 1952 ntBASIC17.76■□□□□ 0.43
SRRM4A7MD48 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SRRM4A7MD48 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM4A7MD48 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SRRM4A7MD48 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM4A7MD48 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.76■□□□□ 0.43
SRRM4A7MD48 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SRRM4A7MD48 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 GUSBP5-201ENST00000418136 578 ntBASIC17.75■□□□□ 0.43
SRRM4A7MD48 KRT16P3-201ENST00000439127 1283 ntBASIC17.75■□□□□ 0.43
SRRM4A7MD48 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM4A7MD48 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.75■□□□□ 0.43
SRRM4A7MD48 AC009086.3-201ENST00000623486 1008 ntBASIC17.75■□□□□ 0.43
SRRM4A7MD48 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM4A7MD48 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.75■□□□□ 0.43
SRRM4A7MD48 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 AC004687.1-201ENST00000579003 1625 ntBASIC17.74■□□□□ 0.43
SRRM4A7MD48 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SRRM4A7MD48 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM4A7MD48 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.73■□□□□ 0.43
SRRM4A7MD48 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
SRRM4A7MD48 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SRRM4A7MD48 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.73■□□□□ 0.43
SRRM4A7MD48 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.73■□□□□ 0.43
SRRM4A7MD48 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.73■□□□□ 0.43
SRRM4A7MD48 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM4A7MD48 AC139530.1-201ENST00000575312 1977 ntBASIC17.73■□□□□ 0.43
SRRM4A7MD48 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
SRRM4A7MD48 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM4A7MD48 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM4A7MD48 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM4A7MD48 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM4A7MD48 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM4A7MD48 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SRRM4A7MD48 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.72■□□□□ 0.43
SRRM4A7MD48 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.72■□□□□ 0.43
SRRM4A7MD48 AL117332.1-201ENST00000622628 974 ntBASIC17.72■□□□□ 0.43
SRRM4A7MD48 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM4A7MD48 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.72■□□□□ 0.43
SRRM4A7MD48 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SRRM4A7MD48 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.72■□□□□ 0.43
SRRM4A7MD48 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM4A7MD48 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM4A7MD48 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SRRM4A7MD48 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM4A7MD48 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SRRM4A7MD48 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM4A7MD48 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM4A7MD48 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.71■□□□□ 0.43
SRRM4A7MD48 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM4A7MD48 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM4A7MD48 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM4A7MD48 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM4A7MD48 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms