Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 LINC00565-201ENST00000562710 2331 ntBASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC087742.1-201ENST00000575880 1738 ntBASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MIR4787-201ENST00000607364 84 ntBASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV10-1A0A0K0K1A3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC139530.1-201ENST00000575312 1977 ntBASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC009102.2-201ENST00000606772 1639 ntBASIC15.54■□□□□ 0.08
TRBV10-1A0A0K0K1A3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 LINC01960-201ENST00000563759 1884 ntBASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC010997.5-201ENST00000609182 354 ntBASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV10-1A0A0K0K1A3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV10-1A0A0K0K1A3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV10-1A0A0K0K1A3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV10-1A0A0K0K1A3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV10-1A0A0K0K1A3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV10-1A0A0K0K1A3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV10-1A0A0K0K1A3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV10-1A0A0K0K1A3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms