Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IGHV3-43A0A0B4J1X8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IGHV3-43A0A0B4J1X8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.27■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IGHV3-43A0A0B4J1X8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IGHV3-43A0A0B4J1X8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.27■□□□□ 0.51
IGHV3-43A0A0B4J1X8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
IGHV3-43A0A0B4J1X8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
IGHV3-43A0A0B4J1X8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.27■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 GUSBP5-201ENST00000418136 578 ntBASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
IGHV3-43A0A0B4J1X8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.25■□□□□ 0.51
IGHV3-43A0A0B4J1X8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 C17orf82-201ENST00000623772 1530 ntBASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 DUX4L4-201ENST00000566884 1269 ntBASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV3-43A0A0B4J1X8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AL117332.1-201ENST00000622628 974 ntBASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ESRRAP2-201ENST00000418437 1549 ntBASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV3-43A0A0B4J1X8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AC009086.3-201ENST00000623486 1008 ntBASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 AC004687.1-201ENST00000579003 1625 ntBASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.22■□□□□ 0.51
IGHV3-43A0A0B4J1X8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms