Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AC010086.2-201ENST00000428616 226 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 CDCA4P4-201ENST00000435216 680 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ZNF877P-201ENST00000437614 612 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 MIR5091-201ENST00000578707 93 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AP003392.6-201ENST00000607709 325 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AC048382.6-201ENST00000621980 1223 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 Z82244.1-201ENST00000631502 840 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 AC020931.1-201ENST00000589622 1346 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 AC125807.2-201ENST00000513358 3514 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 NHP2P1-201ENST00000335274 462 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 CCL19-202ENST00000378800 414 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 SERF2-204ENST00000402131 586 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 SDCBP2P1-201ENST00000416115 614 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 AC133141.1-201ENST00000443015 339 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 IGHVII-74-1-201ENST00000517572 241 ntBASIC12.12□□□□□ -0.47
NPIPA3F8WFD2 AP000920.1-201ENST00000531824 344 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms