Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC10.9□□□□□ -0.67
RCL1Q9Y2P8 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RCL1Q9Y2P8 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RCL1Q9Y2P8 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ALK-205ENST00000618119 4646 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC091807.1-201ENST00000418838 1544 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AP003108.3-201ENST00000623765 2234 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC007598.3-201ENST00000623077 1678 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ATP8B3-202ENST00000525591 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 NME4-203ENST00000397722 1232 ntTSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 MIR1307-201ENST00000408840 149 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 RPL7P3-201ENST00000441388 714 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CRB3P1-201ENST00000449338 276 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 SAA2-206ENST00000530400 323 ntTSL 3 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 KRT8P1-201ENST00000557533 1207 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 NDUFB10P1-201ENST00000567319 521 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC132812.1-201ENST00000583145 892 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AL096865.1-201ENST00000606796 927 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC008687.7-202ENST00000637404 953 ntBASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 IYD-208ENST00000500320 2158 ntTSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC10.89□□□□□ -0.67
RCL1Q9Y2P8 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RCL1Q9Y2P8 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms