Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP13P45452 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.87□□□□□ -0.19
MMP13P45452 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MMP13P45452 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
MMP13P45452 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.87□□□□□ -0.19
MMP13P45452 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.87□□□□□ -0.19
MMP13P45452 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.87□□□□□ -0.19
MMP13P45452 AL606495.2-201ENST00000605867 535 ntBASIC13.87□□□□□ -0.19
MMP13P45452 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.87□□□□□ -0.19
MMP13P45452 Z82244.1-201ENST00000631502 840 ntBASIC13.87□□□□□ -0.19
MMP13P45452 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 ANKRD20A7P-201ENST00000402318 2414 ntBASIC13.87□□□□□ -0.19
MMP13P45452 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.87□□□□□ -0.19
MMP13P45452 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MMP13P45452 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC13.87□□□□□ -0.19
MMP13P45452 AL450468.2-201ENST00000565955 1889 ntBASIC13.87□□□□□ -0.19
MMP13P45452 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.86□□□□□ -0.19
MMP13P45452 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MMP13P45452 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC13.86□□□□□ -0.19
MMP13P45452 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC13.86□□□□□ -0.19
MMP13P45452 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 AL162615.1-201ENST00000429893 1653 ntBASIC13.86□□□□□ -0.19
MMP13P45452 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.86□□□□□ -0.19
MMP13P45452 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.86□□□□□ -0.19
MMP13P45452 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.86□□□□□ -0.19
MMP13P45452 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.86□□□□□ -0.19
MMP13P45452 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 PIGCP1-201ENST00000527583 895 ntBASIC13.86□□□□□ -0.19
MMP13P45452 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.86□□□□□ -0.19
MMP13P45452 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.86□□□□□ -0.19
MMP13P45452 DNM1P30-201ENST00000563586 452 ntBASIC13.86□□□□□ -0.19
MMP13P45452 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.86□□□□□ -0.19
MMP13P45452 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MMP13P45452 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
MMP13P45452 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms