Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC1A1P43005 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 AC138894.2-201ENST00000602838 371 ntBASIC13.94□□□□□ -0.18
SLC1A1P43005 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC1A1P43005 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC1A1P43005 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLC1A1P43005 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC1A1P43005 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A1P43005 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A1P43005 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SLC1A1P43005 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SLC1A1P43005 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
SLC1A1P43005 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 AC091046.1-201ENST00000331871 207 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 U3.5-201ENST00000363448 216 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 AP000356.3-201ENST00000382243 753 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC1A1P43005 AC007274.1-201ENST00000439805 662 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC1A1P43005 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC1A1P43005 AC134698.3-201ENST00000523880 214 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
SLC1A1P43005 AP000911.2-201ENST00000534330 502 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.93□□□□□ -0.18
SLC1A1P43005 RN7SL357P-201ENST00000581065 298 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 CLPP-205ENST00000596605 646 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 DUX4L33-201ENST00000635217 958 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 AL162615.1-201ENST00000429893 1653 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
SLC1A1P43005 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC1A1P43005 AC018445.4-201ENST00000624066 2291 ntBASIC13.93□□□□□ -0.18
SLC1A1P43005 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A1P43005 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms