Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 PES1P2-201ENST00000449745 1735 ntBASIC13.81□□□□□ -0.2
SCG3Q8WXD2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCG3Q8WXD2 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AC011700.1-201ENST00000610409 2627 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AC018445.4-201ENST00000624066 2291 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 RPL35P9-201ENST00000446059 350 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 RN7SL23P-201ENST00000484055 275 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 RNA5SP406-201ENST00000516106 112 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 KLF17P1-201ENST00000547105 1126 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 SNORD3B-1-201ENST00000577988 758 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AP001542.1-201ENST00000591314 200 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 RCC2P5-201ENST00000492126 1487 ntBASIC13.8□□□□□ -0.2
SCG3Q8WXD2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.8□□□□□ -0.2
SCG3Q8WXD2 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 AC114501.1-201ENST00000445949 172 ntBASIC13.79□□□□□ -0.2
SCG3Q8WXD2 AL157792.1-201ENST00000488281 530 ntBASIC13.79□□□□□ -0.2
SCG3Q8WXD2 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 AC068867.1-201ENST00000559855 150 ntBASIC13.79□□□□□ -0.2
SCG3Q8WXD2 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 MIR4472-1-201ENST00000584349 80 ntBASIC13.79□□□□□ -0.2
SCG3Q8WXD2 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.79□□□□□ -0.2
SCG3Q8WXD2 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 AC006213.4-201ENST00000616184 634 ntBASIC13.79□□□□□ -0.2
SCG3Q8WXD2 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.79□□□□□ -0.2
SCG3Q8WXD2 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms