Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 VDAC1P11-201ENST00000458323 852 ntBASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AC112250.1-201ENST00000504640 745 ntBASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 AL513497.1-201ENST00000624273 2083 ntBASIC12.21□□□□□ -0.45
NPIPA3F8WFD2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NPIPA3F8WFD2 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 PPT1-213ENST00000641319 2388 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 OR10N1P-201ENST00000392758 869 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 AC234644.1-201ENST00000406065 370 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 AC136604.1-202ENST00000425471 771 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 SEPHS2P1-201ENST00000511618 1162 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 METTL7AP1-201ENST00000547343 496 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 GGNBP1-204ENST00000613113 887 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 MEP1AP1-201ENST00000636082 1097 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 LINC00567-201ENST00000569854 3409 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 MKRN5P-201ENST00000445263 1467 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms