Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 AC005077.3-201ENST00000449614 213 ntBASIC12.56□□□□□ -0.4
CNIH4Q9P003 PIN4P1-201ENST00000451079 396 ntBASIC12.56□□□□□ -0.4
CNIH4Q9P003 GULOP-201ENST00000454030 748 ntBASIC12.56□□□□□ -0.4
CNIH4Q9P003 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 LINC00634-202ENST00000505157 222 ntBASIC12.56□□□□□ -0.4
CNIH4Q9P003 CTBP2P4-201ENST00000513884 920 ntBASIC12.56□□□□□ -0.4
CNIH4Q9P003 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 AL022323.5-201ENST00000624101 2059 ntBASIC12.56□□□□□ -0.4
CNIH4Q9P003 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.56□□□□□ -0.4
CNIH4Q9P003 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CNIH4Q9P003 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.55□□□□□ -0.4
CNIH4Q9P003 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 AC132812.1-201ENST00000583145 892 ntBASIC12.55□□□□□ -0.4
CNIH4Q9P003 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 CSTP2-201ENST00000610599 398 ntBASIC12.55□□□□□ -0.4
CNIH4Q9P003 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.55□□□□□ -0.4
CNIH4Q9P003 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CNIH4Q9P003 AL031432.4-201ENST00000641729 2190 ntBASIC12.54□□□□□ -0.4
CNIH4Q9P003 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNIH4Q9P003 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNIH4Q9P003 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNIH4Q9P003 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CNIH4Q9P003 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CNIH4Q9P003 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNIH4Q9P003 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CNIH4Q9P003 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms