Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.82□□□□□ -0.52
AP3S1Q92572 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.82□□□□□ -0.52
AP3S1Q92572 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.82□□□□□ -0.52
AP3S1Q92572 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.82□□□□□ -0.52
AP3S1Q92572 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.82□□□□□ -0.52
AP3S1Q92572 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.82□□□□□ -0.52
AP3S1Q92572 AL160314.3-201ENST00000556041 767 ntBASIC11.82□□□□□ -0.52
AP3S1Q92572 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.82□□□□□ -0.52
AP3S1Q92572 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC11.82□□□□□ -0.52
AP3S1Q92572 AP000894.1-201ENST00000584430 520 ntBASIC11.82□□□□□ -0.52
AP3S1Q92572 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.82□□□□□ -0.52
AP3S1Q92572 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 HLA-C-210ENST00000640219 976 ntBASIC11.82□□□□□ -0.52
AP3S1Q92572 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC11.82□□□□□ -0.52
AP3S1Q92572 KCNH8-201ENST00000328405 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
AP3S1Q92572 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AP3S1Q92572 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 OACYLP-201ENST00000417918 2208 ntBASIC11.82□□□□□ -0.52
AP3S1Q92572 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC11.82□□□□□ -0.52
AP3S1Q92572 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC11.82□□□□□ -0.52
AP3S1Q92572 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 AC008806.1-201ENST00000624962 2443 ntBASIC11.81□□□□□ -0.52
AP3S1Q92572 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
AP3S1Q92572 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.81□□□□□ -0.52
AP3S1Q92572 KLF2P1-201ENST00000447438 1042 ntBASIC11.81□□□□□ -0.52
AP3S1Q92572 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.81□□□□□ -0.52
AP3S1Q92572 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.81□□□□□ -0.52
AP3S1Q92572 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.81□□□□□ -0.52
AP3S1Q92572 AL132655.2-201ENST00000596276 594 ntBASIC11.81□□□□□ -0.52
AP3S1Q92572 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC11.81□□□□□ -0.52
AP3S1Q92572 CHCHD2P3-201ENST00000603038 451 ntBASIC11.81□□□□□ -0.52
AP3S1Q92572 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 AC079781.4-201ENST00000641908 219 ntBASIC11.81□□□□□ -0.52
AP3S1Q92572 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC11.81□□□□□ -0.52
AP3S1Q92572 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
AP3S1Q92572 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
AP3S1Q92572 AC007541.1-201ENST00000570282 1469 ntBASIC11.81□□□□□ -0.52
AP3S1Q92572 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
AP3S1Q92572 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
AP3S1Q92572 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
AP3S1Q92572 IYD-208ENST00000500320 2158 ntTSL 2 BASIC11.81□□□□□ -0.52
AP3S1Q92572 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC11.81□□□□□ -0.52
AP3S1Q92572 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC11.81□□□□□ -0.52
AP3S1Q92572 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
AP3S1Q92572 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AP3S1Q92572 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC11.8□□□□□ -0.52
AP3S1Q92572 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC11.8□□□□□ -0.52
AP3S1Q92572 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
AP3S1Q92572 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AP3S1Q92572 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms