Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 METTL23-211ENST00000589977 617 ntTSL 3 BASIC16.26■□□□□ 0.19
PDE6BP35913 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC16.26■□□□□ 0.19
PDE6BP35913 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC16.26■□□□□ 0.19
PDE6BP35913 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDE6BP35913 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC16.26■□□□□ 0.19
PDE6BP35913 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC16.26■□□□□ 0.19
PDE6BP35913 AC012531.1-201ENST00000562848 2680 ntBASIC16.26■□□□□ 0.19
PDE6BP35913 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PDE6BP35913 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 BEND3P1-201ENST00000421591 1944 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PDE6BP35913 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDE6BP35913 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.25■□□□□ 0.19
PDE6BP35913 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.25■□□□□ 0.19
PDE6BP35913 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDE6BP35913 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 GGT8P-201ENST00000418938 532 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC16.25■□□□□ 0.19
PDE6BP35913 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC16.25■□□□□ 0.19
PDE6BP35913 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PDE6BP35913 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC16.25■□□□□ 0.19
PDE6BP35913 AC007881.1-201ENST00000437460 187 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC16.25■□□□□ 0.19
PDE6BP35913 CDCA4P3-201ENST00000442572 689 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 RN7SL69P-201ENST00000468423 272 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 RPL7AP53-201ENST00000468834 793 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC16.25■□□□□ 0.19
PDE6BP35913 AC103706.1-201ENST00000561761 679 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC16.25■□□□□ 0.19
PDE6BP35913 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC16.25■□□□□ 0.19
PDE6BP35913 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC16.25■□□□□ 0.19
PDE6BP35913 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PDE6BP35913 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC16.25■□□□□ 0.19
PDE6BP35913 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.25■□□□□ 0.19
PDE6BP35913 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 ST20-AS1-201ENST00000560255 4223 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC16.25■□□□□ 0.19
PDE6BP35913 KRT18P40-201ENST00000599859 1571 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 OR2I1P-210ENST00000642037 4691 ntBASIC16.25■□□□□ 0.19
PDE6BP35913 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6BP35913 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDE6BP35913 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC16.24■□□□□ 0.19
PDE6BP35913 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.24■□□□□ 0.19
PDE6BP35913 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC16.24■□□□□ 0.19
PDE6BP35913 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC16.24■□□□□ 0.19
PDE6BP35913 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 AC069061.4-201ENST00000581294 1347 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 HLA-DRB6-202ENST00000437183 1090 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC16.24■□□□□ 0.19
PDE6BP35913 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PDE6BP35913 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC16.24■□□□□ 0.19
PDE6BP35913 AD000091.1-201ENST00000592379 287 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 FAM223B-202ENST00000598177 713 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC16.24■□□□□ 0.19
PDE6BP35913 MIR6871-201ENST00000613433 56 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 AC091905.3-201ENST00000624959 234 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 FAM223A-202ENST00000625204 713 ntBASIC16.24■□□□□ 0.19
PDE6BP35913 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PDE6BP35913 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDE6BP35913 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6BP35913 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms