Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AP003969.2-201ENST00000623739 2275 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.99□□□□□ -0.49
ZIC3O60481 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ZIC3O60481 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 PTGER4P2-201ENST00000328411 252 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 PGAM1P11-201ENST00000416729 680 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC11.99□□□□□ -0.49
ZIC3O60481 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 BICD1P1-201ENST00000457832 1222 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 PTGER4P3-201ENST00000458150 252 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 GDNF-207ENST00000515058 764 ntTSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 KNOP1P1-201ENST00000542108 989 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC11.99□□□□□ -0.49
ZIC3O60481 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC11.99□□□□□ -0.49
ZIC3O60481 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC11.99□□□□□ -0.49
ZIC3O60481 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 MIR6756-201ENST00000616240 63 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 AC244097.1-201ENST00000621631 1216 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 AL160287.1-203ENST00000637960 1061 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 AC244154.1-201ENST00000620148 1555 ntBASIC11.99□□□□□ -0.49
ZIC3O60481 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.99□□□□□ -0.49
ZIC3O60481 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ZIC3O60481 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZIC3O60481 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
ZIC3O60481 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 GH1-203ENST00000351388 685 ntTSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 COX20P1-201ENST00000366529 357 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.98□□□□□ -0.49
ZIC3O60481 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC11.98□□□□□ -0.49
ZIC3O60481 IQCF4-203ENST00000428561 420 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 KRT8P30-201ENST00000432100 650 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 AC244197.1-201ENST00000456494 951 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC11.98□□□□□ -0.49
ZIC3O60481 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC11.98□□□□□ -0.49
ZIC3O60481 IGHVII-74-1-201ENST00000517572 241 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 AC123912.6-201ENST00000612657 315 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 FRG2EP-201ENST00000634243 835 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 BX322534.1-201ENST00000635574 241 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 AC215524.1-201ENST00000635696 241 ntBASIC11.98□□□□□ -0.49
ZIC3O60481 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
ZIC3O60481 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ZIC3O60481 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZIC3O60481 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms