Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AL513497.1-201ENST00000624273 2083 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 BANF1P3-201ENST00000412556 261 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC098934.1-203ENST00000442868 1262 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC073150.1-201ENST00000450406 1084 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC012618.1-201ENST00000461223 412 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 RN7SL258P-201ENST00000478664 300 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 MIR4706-201ENST00000582134 82 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC020922.3-201ENST00000595064 547 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AC073335.2-201ENST00000610177 3441 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 KRT8P19-201ENST00000551916 1455 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
AMBRA1Q9C0C7 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.58□□□□□ -0.39
AMBRA1Q9C0C7 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
AMBRA1Q9C0C7 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 FTLP1-201ENST00000449155 526 ntBASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AC242376.1-201ENST00000559033 726 ntBASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 SPCS2P2-201ENST00000603270 608 ntBASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AC097724.1-201ENST00000609581 426 ntBASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AF254983.2-201ENST00000612331 135 ntBASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms